TABLE 4.
Number of different profiles and genotypic diversity among the 100 SB0120 panel generated by the 24 MIRU-VNTR or different subsets of MIRU-VNTR
Typing loci | No. of loci | No. of genotypes | Genotypic diversity |
---|---|---|---|
MIRU-VNTR loci | 24 | 89 | 0.987 |
ETR-A, ETR-B, ETR-E, QUB11a, QUB11b, QUB15, QUB23, QUB26, MIRU 26, MIRU 40, VNTR 1895, VNTR 3232, VNTR 3336 | 13 | 89 | 0.987 |
ETR-A, ETR-B, ETR-E, QUB11a, QUB11b, QUB15, QUB23, QUB26, MIRU 26, VNTR 1895, VNTR 3232, VNTR 3336 | 11 | 87 | 0.987 |
ETR-A, ETR-B, ETR-E, QUB11a, QUB11b, QUB15, QUB26, MIRU 26, VNTR 1895, VNTR 3232, VNTR 3336 | 10 | 85 | 0.986 |
ETR-A, ETR-B, QUB11a, QUB11b, QUB15, QUB26, MIRU26, VNTR 3232, VNTR 3336 | 9 | 79 | 0.983 |