TABLE 1.
Ovine fecal and tissue samples used in this studya
Group | Protocol and laboratory | Type of sample (no. of samples/pool) | No. of fecal samples cultured | No. of tissue samples cultured | No. of independent trials | No. of independent farms | No. of independent submissionsd | Source | Yr |
---|---|---|---|---|---|---|---|---|---|
1 | Initial protocol; laboratory A | Pooled fecal samples (at most 50) | 1,535 | 0 | 1 | 296 | 343 | Expt 3b | 1998 |
2 | Fixed protocol; laboratory A | Pooled fecal samples (10-50) | 378 | 0 | 1 | 51 | 57 | Expt 2b | 1998 |
3 | Fixed protocol; laboratory A | Pooled fecal samples (at most 50) | 4,619 | 0 | 1 | 936 | 936 | Unpublished data | 1999-2001 |
4 | Final protocol; ampicillin included in some cultures; laboratory B | Pooled fecal samples (5); individual fecal samples; tissue samplesc | 2,467 | 772 | 1 | 1 | 15 | Field trial; feces collected every 3 mo; tissues collected at necropsy at 2.5 yr of age | 2002-2005 |
5 | Final protocol; laboratory B | Pooled fecal samples (5-50); individual fecal samples; tissue samplesc | 2,599 | 1,805 | 18 | 137 | 172 | 5 field trials; 6 experimental infection trials; 7 on-farm studies | 2002-2008 |
Total | 11,598 | 2,577 | 22 | 1,421 | 1,523 |
Farms represent the smallest geographic unit of clustering of samples. There were multiple submissions of samples from some farms.
Details are provided in reference 43.
Ileum and jejunum pooled; intestinal lymph nodes pooled.
A submission is a group of samples collected and consigned from the same farm at the same time.