Table 2. Native PDGF was found in healthy donor serum purified by core shell particles and measured by nano reverse phase liquid chromatography mass spectrometry (RPLC-MS/MS).
| Reference | Accessiona | Ppep b | Sf c | Scored | MWe | ePeptide |
| properdin P factor, complement | 4505737 | 2.22E-15 | 4.56 | 50.27 | 51242.0 | 6 |
| vinculin isoform meta-VCL | 7669550 | 5.55E-15 | 11.49 | 130.23 | 123721.9 | 13 |
| talin 1 | 16753233 | 1.22E-14 | 32.50 | 350.29 | 269497.3 | 38 |
| angiogenin, ribonuclease, RNase A family, 5 precursor | 4557313 | 2.70E-13 | 6.45 | 70.24 | 16539.4 | 10 |
| serum amyloid A4, constitutive | 10835095 | 4.89E-12 | 2.89 | 30.26 | 14797.3 | 4 |
| serum deprivation response protein | 4759082 | 3.23E-10 | 1.85 | 20.22 | 47144.6 | 2 |
| peroxiredoxin 6 | 4758638 | 4.14E-09 | 0.90 | 10.20 | 25019.2 | 1 |
| glyceraldehyde-3-phosphate dehydrogenase | 7669492 | 2.26E-08 | 1.66 | 20.19 | 36030.4 | 2 |
| tissue inhibitor of metalloproteinase 3 precursor | 4507513 | 2.57E-08 | 1.88 | 20.17 | 24128.8 | 2 |
| parvin, beta isoform b | 20127528 | 4.09E-08 | 0.96 | 10.17 | 41688.1 | 1 |
| chemokine (C-C motif) ligand 28 | 22538811 | 7.08E-08 | 0.98 | 10.22 | 14270.4 | 1 |
| talin 2 | 22035665 | 8.11E-08 | 1.52 | 20.16 | 271382.8 | 2 |
| S100 calcium-binding protein A9 | 4506773 | 1.05E-07 | 0.95 | 10.20 | 13233.5 | 1 |
| ras suppressor protein 1 isoform 2 | 34577083 | 2.56E-07 | 1.76 | 20.25 | 25529.6 | 2 |
| serum amyloid P component precursor | 4502133 | 3.33E-07 | 1.86 | 20.15 | 25371.1 | 2 |
| tubulin, alpha, ubiquitous | 57013276 | 4.45E-07 | 2.67 | 30.17 | 50119.6 | 3 |
| chemokine (C-X-C motif) ligand 12 | 76563933 | 6.29E-07 | 2.73 | 30.21 | 13696.7 | 3 |
| enolase 1 | 4503571 | 7.04E-07 | 0.80 | 10.15 | 47139.4 | 1 |
| cathelicidin antimicrobial peptide | 39753970 | 1.08E-06 | 0.90 | 10.13 | 19289.2 | 1 |
| cell division cycle 42 isoform 1 | 89903012 | 1.37E-06 | 0.94 | 10.16 | 21245.0 | 1 |
| cardiac muscle alpha actin proprotein | 4885049 | 1.59E-06 | 4.25 | 50.21 | 41991.9 | 5 |
| PREDICTED: similar to ARP3 actin-related protein 3 homolog B | 113419329 | 1.79E-06 | 0.95 | 10.15 | 43634.8 | 1 |
| brain-derived neurotrophic factor isoform a preproprotein | 25306253 | 2.20E-06 | 1.87 | 20.19 | 27800.0 | 2 |
| brain-derived neurotrophic factor isoform c preproprotein | 25306261 | 2.20E-06 | 1.87 | 20.19 | 29798.0 | 2 |
| PREDICTED: similar to Prostate, ovary, testis expressed protein on chromosome 2 | 113413194 | 4.56E-06 | 3.09 | 40.17 | 121366.6 | 4 |
| defensin, alpha 1 preproprotein | 4758146 | 5.92E-06 | 0.91 | 10.15 | 10194.2 | 2 |
| defensin, alpha 3 preproprotein | 4885179 | 5.92E-06 | 0.91 | 10.15 | 10238.2 | 2 |
| small inducible cytokine A24 | 22165427 | 6.03E-06 | 0.93 | 10.14 | 13124.8 | 1 |
| villin 2 | 21614499 | 9.13E-06 | 0.92 | 10.14 | 69369.8 | 1 |
| radixin | 4506467 | 9.13E-06 | 0.92 | 10.14 | 68521.5 | 1 |
| platelet-derived growth factor beta isoform 1, preproprotein | 4505681 | 1.75E-05 | 0.91 | 10.15 | 27266.1 | 1 |
| platelet-derived growth factor beta isoform 2, preproprotein | 15451786 | 1.75E-05 | 0.91 | 10.15 | 25486.2 | 1 |
| kininogen 1 | 4504893 | 1.81E-05 | 1.77 | 20.19 | 47852.7 | 2 |
| S100 calcium-binding protein A8 | 21614544 | 2.03E-05 | 0.93 | 10.16 | 10827.7 | 1 |
| transgelin 2 | 4507357 | 1.06E-04 | 0.88 | 10.14 | 22377.2 | 1 |
| ras-related GTP-binding protein | 33695095 | 1.50E-04 | 0.93 | 10.13 | 22454.6 | 1 |
| vitamin D-binding protein precursor | 32483410 | 6.18E-04 | 0.87 | 10.18 | 52883.0 | 1 |
a
“Accession” displays the unique protein identification number for the sequence.
b
“Ppep” displays the probability value for the peptide.
c
“Sf” displays the final score that indicates how good the protein match is.
d
“score” displays a value that is based upon the probability that the peptide is a random match to the spectral data.
e
“Peptide” displays the total number peptide matches.