TABLE I. Sequences of trypsin-produced peptides from NF-κB oligonucleotide pull down affinity purified proteins identified by MS/MS.

Antigen and band 3 is identified as 102-kDa nucleolin.
Peptides from band 1 (36-kDa protein)
LLSISGK
FINYVK
LLSISGKR
GGSLPKVEAK
GPSSVEDIKAK
VEAKFINYVK
MQASIEKGGSLPK
FINYVKNCFR
MQASIEKGGSLPK
VDNDENEHQLSLR
MTDQEAIQDLWQWR
MTDQEAIQDLWQWRK
MSVQPTVSLGGFEITPPVVLR
TVSLGAGAKDELHIVEAEAMNYEGSPIK
Peptides from band 2 (68-kDa protein)
FTYR
MPFTEK
SQIYGSR
KMPFTEK
IMATPEQVGK
ILELDQFKGQQGQK
VEYSEEELKTHISK
TFNTSTGGLLLPSDTKR
ELVYPPDYNPEGKVTK
IMLFTNEDNPHGNDSAK
Peptides from band 3 (80-kDa protein)
TLFVK
VAVATPAK
ALVATPGK
KAAATPAK
ALELTGLK
ALVATPGKK
TGISDVFAK
SQPSKTLFVK
AIRLELQGPR
SISLYYTGEK
EVFEDAAEIR
ATFIKVPQNQNGK
TFEEKQGTEIDGR
GLSEDTTEETLKESFDGSVR
VEGTEPTTAFNLFVGNLNFNK
TLVLSNLSYSATEETLQEVFEK