Table 2.
SeMet | Native | |||
---|---|---|---|---|
Data collection and phasing | ||||
Wavelength (λ) | 0.9797 | 0.9798 | 1.02 | 1.116 |
Resolution (Å) | 50.0–2.60 | |||
Rsyma | 0.092 (0.22)b | 0.06 (0.19) | 0.07 (0.21) | 0.046 (0.14) |
I/σ(I) | 12.3 (4.1) | 16.1 (5.5) | 14.5 (4.7) | 25.6 (8.4) |
Total reflections (#) | 43794 | 44245 | 43757 | 54688 |
Unique reflections (#) | 12590 | 12712 | 12621 | 14174 |
Completeness (%) | 100 (100) | 99.9 (100) | 100 (100) | 100 (99.8) |
Selenium sites (#) | 10 | |||
Overall figure of meritc | 0.52 | |||
Native MepR refinement statistics | ||||
Resolution range (Å) | 50.0–2.40 | |||
Rwork/Rfree(%)d | 23.9/28.8 | |||
Atoms (#) | ||||
Protein | 2128 | |||
Sulphate ions | 5 | |||
Solvent | 196 | |||
B factors (Å2) | 38.2 | |||
Rmsd | ||||
Bond lengths (Å) | 0.006 | |||
Bond angles (°) | 1.007 | |||
B for bonded main-chain atoms (Å2) | 1.397 | |||
Ramachandran analysis | ||||
Most favoured (%) | 95.9 | |||
Add. allowed (%) | 4.1 | |||
Gen. allowed (%) | 0.0 | |||
Disallowed (%) | 0.0 |
aRsym = ∑∑|Ihkl − Ihkl(j)|/∑Ihkl, where Ihkl(j) is the observed intensity and Ihkl is the final average intensity value.
bValues in parentheses are for the highest resolution shell.
cFigure of Merit = <|ΣP(α)eiα/ΣP(α)|>, where α is the phase and P(α) is the phase probability distribution.
dRwork = Σ||Fobs| − |Fcalc||/Σ|Fobs| and Rfree = Σ||Fobs| − |Fcalc||/Σ|Fobs|; where all reflections belong to a test set of 5% randomly selected reflections.