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. 2009 Feb;19(2):276–283. doi: 10.1101/gr.075671.107

Table 1.

Validation against 10 acute lymphoblastic leukemia samples with known karyotype and comparison to three other commonly used methods

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Output from the algorithms was queried for the aberrations detected by karyotype. OverUnder was run with a window size of 101 (default) and 51 (adjusted). Other algorithm settings (both default and adjusted) can be found in Methods.