Table 2. Kinetic Parameters for Substrate Inhibition in Pol X-Catalyzed Steady-State Reactions.
| global fittingb |
|||||||||
|---|---|---|---|---|---|---|---|---|---|
| varied substrate | nonvaried substrate | inhibitor | Vmax (nmol/min) | Km (μM) | type of Inhibitiona | Vmax (nmol/min) | Km (μM) | KI (μM) | KII (μM) |
| dCTP | 45(G) | none | 0.49 ± 0.02 | 45 ± 5 | UC | 0.47 | 41 | 0.21 | |
| 50 nM 35dd(G) | 0.35 ± 0.02 | 27 ± 2 | |||||||
| 200 nM 35dd(G) | 0.24 ± 0.01 | 23 ± 3 | |||||||
| 500 nM 35dd(G) | 0.14 ± 0.01 | 10 ± 1 | |||||||
| 45(G) | dCTP | none | 0.46 ± 0.01 | 0.003 ± 0.001 | C | 0.45 | 0.0029 | 0.0064 | |
| 50 nM 35dd(G) | 0.43 ± 0.02 | 0.029 ± 0.004 | |||||||
| 200 nM 35dd(G) | 0.45 ± 0.03 | 0.090 ± 0.012 | |||||||
| 500 nM 35dd(G) | 0.42 ± 0.08 | 0.182 ± 0.051 | |||||||
| dATP | 45(T) | none | 1.5 ± 0.03 | 13 ± 2 | NC | 1.51 | 13 | 0.29 | 0.84 |
| 50 nM 35dd(G) | 1.4 ± 0.04 | 14 ± 2 | |||||||
| 200 nM 35dd(G) | 1.3 ± 0.04 | 19 ± 3 | |||||||
| 500 nM 35dd(G) | 0.91 ± 0.02 | 21 ± 2 | |||||||
| 45(T) | dATP | none | 1.9 ± 0.06 | 0.030 ± 0.003 | C | 1.88 | 0.030 | 0.46 | |
| 50 nM 35dd(G) | 1.9 ± 0.04 | 0.035 ± 0.002 | |||||||
| 200 nM 35dd(G) | 1.9 ± 0.09 | 0.043 ± 0.006 | |||||||
| 500 nM 35dd(G) | 1.7 ± 0.09 | 0.075 ± 0.009 | |||||||
| dCTP | 45(G) | none | 0.52 ± 0.02 | 32 ± 5 | C | 0.51 | 35 | 48 | |
| 20 μM dATP | 0.49 ± 0.02 | 55 ± 7 | |||||||
| 200 μM dATP | 0.56 ± 0.02 | 125 ± 13 | |||||||
| 500 μM dATP | 0.44 ± 0.05 | 299 ± 66 | |||||||
| 45(G) | dCTP | none | 0.59 ± 0.03 | 0.006 ± 0.001 | NC | 0.57 | 0.0056 | 150 | 640 |
| 50 μM dATP | 0.51 ± 0.02 | 0.007 ± 0.001 | |||||||
| 200 μM dATP | 0.45 ± 0.02 | 0.010 ± 0.002 | |||||||
| 500 μM dATP | 0.31 ± 0.01 | 0.012 ± 0.002 | |||||||
C, UC, and NC refer to competitive, uncompetitive, and noncompetitive inhibition patterns, respectively.
Errors associated with global fitting are listed in Table S1 of the Supporting Information.