Table 1.
Primer sequences used for PCR amplification
Amplified region | Primer | Sequence | Product size (bp) |
---|---|---|---|
promoter region (950 bp) and 5' part of rpoB gene (721 bp) | P-rpo-s | 5'-tctagacgagagcggcggtgcaatc | 1671 |
P-rpo-r | 5'-gctcgctggtccagcccagc | ||
3' part of rpoB gene (1258 bp) and downstream region (218 bp) | 3'rpo-s | 5'-cgacaccaagctgggtgcgg | 1476 |
3'rpo-r | 5'-aagcttccagtcgcgagtcggcccg | ||
BstEII fragment of rpoB gene including 81-bp hot spot region | bst-s | 5'-cgcgacaccgtcggcgtgcg | 1852 |
bst-r | 5'-aagtgtcgcgcacctcgcgggc | ||
pMV306 (221 bp) and insert DNA cloned in MCS of this vector | MV-r | 5'-aaggcccagtctttcgactgagc | 221 + insert |
MV-s | 5'-gtggataaccgtattaccgcc | DNA |