Table 1.
SNP | Location (bp) | Gene location | Minor allele | Frequency Control (n = 267) | YA (n = 599) | OA (n = 207) | MI (n = 425) | GC Proband (n = 718) |
---|---|---|---|---|---|---|---|---|
RS974670 | 46 775 302 | Intron | T | 0.31 | 0.30 | 0.38 | 0.33 | 0.37 |
RS12528857 | 46 777 895 | Intron | A | 0.22 | 0.17 | 0.16 | 0.19 | 0.22 |
RS1051931 | 46 780 902 | Exon 12 A379V | A | 0.15 | 0.20 | 0.26 | 0.19 | 0.18 |
RS2216465 | 46 783 978 | Intron | G | 0.43 | 0.38 | 0.29 | 0.38 | 0.35 |
RS4498351 | 46 784 742 | Intron | A | 0.43 | 0.42 | 0.44 | 0.43 | 0.47 |
RS1805018 | 46 787 262 | Exon 8 I198T | G | 0.06 | 0.09 | 0.07 | 0.08 | 0.07 |
RS6899519 | 46 789 859 | Intron | C | 0.34 | 0.29 | 0.21 | 0.29 | 0.27 |
RS1362931 | 46 790 038 | Intron | T | 0.15 | 0.18 | 0.24 | 0.17 | 0.17 |
RS1805017 | 46 792 181 | Exon 5 R92H | A | 0.34 | 0.28 | 0.21 | 0.28 | 0.27 |
RS6929105 | 46 793 245 | Intron | T | 0.21 | 0.28 | 0.31 | 0.26 | 0.25 |
RS12195701 | 46 795 378 | Intron | T | 0.19 | 0.16 | 0.13 | 0.16 | 0.20 |
RS3799863 | 46 795 750 | Intron | T | 0.04 | 0.06 | 0.05 | 0.05 | 0.06 |
RS3799862 | 46 795 890 | Intron | G | 0.21 | 0.28 | 0.30 | 0.26 | 0.24 |
RS12528807 | 46 804 466 | Intron | C | 0.06 | 0.07 | 0.05 | 0.07 | 0.08 |
RS9381475 | 46 807 251 | Intron | T | 0.22 | 0.20 | 0.14 | 0.19 | 0.21 |
RS1421378 | 46 811 472 | 3′-UTR | G | 0.49 | 0.49 | 0.38 | 0.48 | 0.44 |
RS1421379 | 46 813 953 | 3′-UTR | A | 0.20 | 0.19 | 0.14 | 0.18 | 0.20 |
RS9349373 | 46 814 552 | 3′-UTR | A | 0.19 | 0.19 | 0.15 | 0.18 | 0.20 |
RS1862008 | 46 818 238 | 3′-UTR | G | 0.20 | 0.19 | 0.15 | 0.18 | 0.20 |
RS numbers for each SNP is listed, followed by chromosomal location, gene location and minor allele for each SNP. Minor allele frequency is listed for control samples, YA, OA, MI subset and GENECARD probands (GC Proband), followed by the number of individuals in each group (n).