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. Author manuscript; available in PMC: 2009 Nov 7.
Published in final edited form as: J Mol Biol. 2008 Aug 22;383(2):437–453. doi: 10.1016/j.jmb.2008.08.025

Table 3.

Thermodynamic and kinetic parameters describing unfolding and CO binding of Fe2+ cyt c in the absence of denaturant (pH 7, 20 °C) predicted on the basis of Scheme 2

Transition (states i ⬄ j) forward rate (s−1) (i→j) back rate (s−1) (j→i) ΔGij (kcal mol−1)
N ⬄ Ma 4.0×10−3 8.3×10−4 9.8
M ⬄ Ub 12.2
M-CO ⬄ U-COb 11.3
M ⬄ M-COc 6.4 2.9×10−4 −5.8
U ⬄ U-COc 350 3.4×10−3 −6.7
a

The forward rate, kNM, increases with GuHCl concentration (kinetic m-value mNM = 0.6 kcal mol−1 M−1) while the back rate, kMN, is assumed to be independent of denaturant (see ref.25).

b

Kinetic parameters describing the folding and unfolding transitions of Fe2+ cyt c in the presence and absence of CO will be reported elsewhere (Maki, Latypov, Hagen & Roder, in preparation).

c

The CO binding rates are apparent rate constants at 1 mM CO. CO binding and dissociation rates are independent of GuHCl concentrations, except for the M-CO -> M + CO transition, which has a small negative m-value (−0.15 kcal mol−1 M−1; Figure 10(b)).