Table 1.
Primer used for PCR genotyping of Cuban H pylori strains
| Primer | Sequence (5’-3’) | AT °C | Size (bp) | Ref. |
| glmMF | CCCTCACGCCATCAGTCCCAAAAA | 60 | 417 | [18] |
| glmMR | AAGAAGTCAAAAACGCCCCAAAAC | |||
| cagF1 | GATAACAGGCAAGCTTTTGA | 60 | 349 | [7] |
| cagB1 | CTGCAAAAGATTGTTTGGCAGA | |||
| vacAsF | ATGGAAATACAACAAACACAC | 52 | s1-259/s2-286 | [20] |
| vacAsR | CTGCTTGAATGCGCCAAAC | |||
| vacAmF | CAATCTGTCCAATCAAGCGAG | 56 | m1-567/m2-642 | [20] |
| vacAmR | GCGTCAAAATAATTCCAAGG | |||
| bab7-F | CCAAACGAAACAAAAAGCGT | 60 | 271 | [21] |
| bab7-R | GCTTGTGTAAAAGCCGTCGT | |||
| babA2F1 | AATCCAAAAAGGAGAAAAAGTATGAAA | 60 | 832 | [13] |
| babA2R | TGTTAGTGATTTCGGTGTAGGACA | |||
| babA2R6072 | GTTTTCTTTGAGCGCGGGTAAGC | 60 | 607 | [14] |
Forward primer used with primer babA2R or babAR607 to amplify babA2 gene;
Five nucleotides (GTTTT) were added to the original primer designed by Zambon et al[14] to increase specificity.