Table 2.
Gene | Contig ID | Length (bp) |
Reference |
Sexual selection and CHCs | |||
Acp70A-1 | CL0Est000004995273P08 | 157 | [47] |
elongase (CG16905-PA) | CL336Contig1 | 788 | [44] |
desat1 | CL36Contig1 | 1222 | [46] |
desat2 | CL1138Contig1 | 779 | [46] |
Fad2 CG7923-PA | CL67Contig1 | 774 | [45] |
Protein, ejaculatory bulb (CG2668-PA) | CL833Contig1 | 745 | [48,80] |
Sperm protein | CL448Contig1 | 718 | - |
Yolk protein 2 (CG2979-PA) | CL2Contig1 | 803 | [43] |
Yolk protein 3 | CL9Contig1 | 848 | [43] |
Climatic adaptation | |||
Alcohol dehydrogenase (Adh) | CL134Contig1 | 730 | [55] |
Glycerol 3 phosphate dehydrogenase (GPDH) | CL121Contig1 | 787 | [51] |
Hsp23 | CL0EST000004965173F20 | 503 | [54] |
Hsp26 | CL14Contig2 | 839 | [49] |
Hsp83 | CL106Contig1 | 783 | [52] |
Turandot (Tot) | CL106Contig1 | 783 | [50] |
Trehalase (Tre) | CL753Contig1 | 727 | [53] |
Phylogenetic | |||
amylase | CL158Contig1 | 899 | [27] |
α-tubulin (CG1913-PA) | CL110Contig1 | 768 | [56] |
β-tubulin (CG9277-PA) | CL37Contig1 | 795 | [56] |
Cytochrome oxidase subunit II (COII) | CL0Est000004981673F03 | 574 | [27] |
Phosphoglucoisomerase (PGI) | CL217Contig1 | 1010 | [27] |
Rhodopsin (CG5638-PA) | CL0Est000004965473E08 | 434 | [57] |
D. serrata contigs annotated to Drosophila genes of interest from sexual selection, climatic adaptation and phylogenetic studies. Contig identification codes are those used on the D. serrata web database http://www.chenowethlab.org/serrata/index.cgi.