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. 2009 Jan 9;75(6):1597–1603. doi: 10.1128/AEM.02004-08

TABLE 1.

LAMP primers used for assays

Target gene GenBank accession no. Primer Sequence (5′ to 3′)
Cj0414a AL111168 CJ-FIP ACAGCACCGCCACCTATAGT-AGAAGCTTTTTTAAACTAGGGC (F1c-F2)
CJ-BIP AGGCAGCAGAACTTACGCATT-GAGTTTGAAAAAACATTCTACCTCT (B1-B2c)
CJ-F3 GCAAGACAATATTATTGATCGC (F3)
CJ-B3 CTTTCACAGGCTGCACTT (B3c)
CJ-LF CTAGCTGCTACTACAGAACCAC (LFc)
CJ-LB CATCAAGCTTCACAAGGAAA (LB)
CCO0367b AAFL01000003 CC-FIP AAGAGATAAACACCATGATCCCAG-TCATGAATGAGCTTACTTTAGC (F1c-F2)
CC-BIP GCGGCAAAGACTTATGATAAAGC-TACCGCCATTCCTAAAACAAG (B1-B2c)
CC-F3 TGGGAGCGTTTTTGATCT (F3)
CC-B3 AATCAAACTCACCGCCAT (B3c)
CC-LF CCACTACAGCAAAGGTGATG (LFc)
CC-LB CCACGATAGCCTTTATGGA (LB)
a

Presumed to encode an oxidoreductase in the accession number AL111168 sequence, which was submitted to GenBank by Parkhill et al. (28).

b

Presumed to be a gufA gene in the accession number AAFL01000003 sequence, which was submitted to GenBank by Fouts et al. (6).