TABLE 1.
Strain | Origin | Country and year of isolation | Biotype | Multiplexa | DNA polymorphismb
|
Ribogroup (Rt)c | |||
---|---|---|---|---|---|---|---|---|---|
vcg type | vvhA type | 16S rRNA type | Profile | ||||||
CECT 4869 | Diseased eel | Belgium, 1990 | 1 | BT1/3 | E | 2 | A | 2 | AI (1) |
CG106 | Oyster | Taiwan, 1993 | 1 | BT1/3 | C | 1 | B | 1 | AI (2) |
CECT 5168 | Human blood | United States | 1 | BT1/3 | C | 1 | B | 1 | AI (3) |
N87 | Human blood | Japan, 1987 | 1 | BT1/3 | C | 1 | B | 1 | AI (3) |
YJ106 | Human blood | Taiwan | 1 | BT1/3 | C | 1 | B | 1 | AI (3) |
CECT 5167 | Human blood | Japan | 1 | BT1/3 | C | 1 | B | 1 | AI (4) |
MLT 362 | Oyster | United States | 1 | BT1/3 | C | 1 | B | 1 | AI (5) |
VV 425 | Oyster | United States | 1 | BT1/3 | E | 1 | A | Atypical | AI (6) |
ATCC 33816 | Human blood | United States | 1 | BT1/3 | C | 1 | B | 1 | AI (7) |
CG110 | Seawater | Taiwan, 1993 | 1 | BT1/3 | C | 1 | B | 1 | AI (7) |
CG118 | Seawater | Taiwan, 1993 | 1 | BT1/3 | C | 1 | B | 1 | AI (8) |
E4 | Oyster | United States | 1 | BT1/3 | C | 1 | B | 1 | AI (9) |
CG111 | Seawater | Taiwan, 1993 | 1 | BT1/3 | C | 1 | B | 1 | AI (10) |
MLT 364 | Oyster | United States | 1 | BT1/3 | C | 1 | B | 1 | AI (11) |
VV 1003 | Oyster | United States | 1 | BT1/3 | C | 1 | B | 1 | AI (11) |
95-8-7 | Diseased eel | Denmark, 1995 | 2 | BT2-nonSerE | E | 2 | A | 2 | AI (11) |
CS9133 | Human blood | South Korea | 1 | BT1/3 | C | 1 | B | 1 | AI (12) |
CECT 4608 | Eel farm water | Spain, 1990 | 1 | BT1/3 | C | 1 | B | 1 | AII (13) |
KH03 | Human blood | Japan, 2003 | 1 | BT1/3 | C | 1 | B | 1 | AII (14) |
CECT 4862 | Diseased eel | Japan, 1979 | 2 | BT2-SerE | E | 2 | A | 2 | AII (14) |
CECT 5164 | Human blood | United States | 1 | BT1/3 | C | 2 | B | Atypical | AII (15) |
Riu-3 | Seawater | Spain, 2003 | 1 | BT1/3 | E | 2 | A | 2 | AII (16) |
Riu-1 | Seawater | Spain, 2003 | 1 | BT1/3 | E | 2 | AB | Atypical | AII (16) |
94385 | Leg wound | Spain, 2001 | 1 | BT1/3 | E | 2 | B | Atypical | AII (17) |
V4 | Human blood | Australia | 1 | BT1/3 | C | 1 | B | 1 | AII (18) |
PD-2-52 | Eel tank water | Spain, 2003 | 2 | BT2-nonSerE | E | 2 | A | 2 | BI (19) |
PD-2-58 | Eel tank water | Spain, 2003 | 2 | BT2-nonSerE | E | 2 | A | 2 | BI (20) |
CECT 4917 | Diseased eel | Spain, 1997 | 2 | BT2-SerE | E | 2 | A | 2 | BI (21) |
CECT 4998 | Diseased eel | Spain, 1997 | 2 | BT2-SerE | E | 2 | A | 2 | BI (21) |
JE | Oyster | United States | 1 | BT1/3 | E | 2 | B | Atypical | BI (21) |
CECT 5165 | Seawater | United States | 1 | BT1/3 | E | 2 | A | 2 | BI (22) |
A2 | Diseased eel | Spain, 2000 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
An4 | Diseased eel | Spain, 2000 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
An5 | Diseased eel | Spain, 2000 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
An6 | Diseased eel | Spain, 2000 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
CECT 4606 | Eel tank water | Spain, 1990 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
PD-1 | Eel tank water | Spain, 2001 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
PD-12 | Eel tank water | Spain, 2001 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
PD-3 | Eel tank water | Spain, 2001 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
PD-5 | Eel tank water | Spain, 2001 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
V1 | Eel tank water | Spain, 2001 | 1 | BT1/3 | E | 2 | A | 2 | BI (23) |
CECT 4605 | Diseased eel | Spain, 1990 | 2 | BT2-SerE | E | 2 | A | 2 | BI (23) |
11028 | Human disease | Israel, 1996 | 3 | BT1/3 | E | 1 | AB | 3 | BI (24) |
162 | Human disease | Israel, 1997 | 3 | BT1/3 | E | 1 | AB | 3 | BI (24) |
97 | Human disease | Israel, 1997 | 3 | BT1/3 | E | 1 | AB | 3 | BI (24) |
vv12 | Human disease | Israel, 1996 | 3 | BT1/3 | E | 1 | AB | 3 | BI (24) |
vv32 | Human disease | Israel | 3 | BT1/3 | E | 1 | AB | 3 | BI (24) |
CECT 5169 | Human blood | United States | 1 | BT1/3 | C | 1 | B | 1 | BII (25) |
94-9-119 | Human disease | Denmark, 1994 | 1 | BT1/3 | E | 2 | A | 2 | BII (25) |
CECT 4867 | Unknown | Unknown | 1 | BT1/3 | E | 2 | A | 2 | BII (25) |
YN03 | Human blood | Japan, 2003 | 1 | BT1/3 | E | 2 | A | 2 | BII (25) |
535 | Diseased eel | Sweden | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
536 | Diseased eel | Sweden | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
960426-1/4C | Diseased eel | Denmark, 1996 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
960717-1/2F | Diseased eel | Denmark, 1996 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
A10 | Diseased eel | Spain, 2002 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
A11 | Diseased eel | Spain, 2002 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
A13 | Diseased eel | Spain, 2002 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
A14 | Diseased eel | Spain, 2002 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
CECT 5198 | Diseased eel | Spain, 1999 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
CECT 5689 | Diseased eel | Spain, 2002 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
CECT 5768 | Diseased eel | Spain, 2001 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
CECT 5769 | Diseased eel | Spain, 2002 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (25) |
90-2-11 | Diseased eel | Denmark, 1990 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
94-8-112 | Wound infection | Denmark, 1994 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
94-9-123 | Seawater | Denmark, 1994 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
C1 | Healthy eel | Spain, 2003 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CECT 4602 | Diseased eel | Spain, 1990 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CECT 4603 | Diseased eel | Spain, 1990 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CECT 4604 | Diseased eel | Spain, 1990 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CECT 4864 | Diseased eel | Spain, 1994 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CECT 4868 | Diseased eel | Norway, 1990 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CECT 4870 | Diseased eel | Sweden, 1991 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CECT 5762 | Healthy eel | Spain, 2002 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CECT 898 | Diseased eel | Japan, 1979 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
CIP 81.90 | Human blood | France, 1981 | 2 | BT2-SerE | E | 2 | A | 2 | BII (25) |
G83 | Fish | South Korea | 1 | BT1/3 | E | 1 | B | Atypical | BII (25) |
VV 352 | Seawater | United States | 1 | BT1/3 | E | 1 | A | Atypical | BII (25) |
MLT 406 | Seawater | United States | 1 | BT1/3 | E | 2 | A | 2 | BII (26) |
95-8-6 | Diseased eel | Denmark, 1995 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (26) |
CECT 529T | Human blood | United States | 1 | BT1/3 | E | 1 | A | Atypical | BII (26) |
CECT 4174 | Diseased eel | Japan, 1979 | 2 | BT2-SerE | E | 2 | A | 2 | BII (27) |
CG100 | Oyster | Taiwan, 1993 | 1 | BT1/3 | C | 1 | B | 1 | BII (28) |
L49 | Brackish water | Japan | 1 | BT1/3 | E | 2 | A | 2 | BII (29) |
CECT 4607 | Diseased eel | Spain, 1992 | 2 | BT2-SerE | E | 2 | A | 2 | BII (30) |
CECT 4999 | Diseased eel | Spain, 1999 | 2 | BT2-SerE | E | 2 | A | 2 | BII (30) |
PD-2-66 | Eel tank water | Spain, 2003 | 1 | BT1/3 | E | 2 | B | Atypical | BII (30) |
CECT 4601 | Diseased eel | Spain, 1989 | 2 | BT2-SerE | E | 2 | A | 2 | BII (31) |
94-9-130 | Seawater | Denmark, 1994 | 1 | BT1/3 | E | 2 | A | 2 | BII (32) |
CECT 7029 | Diseased eel | Denmark, 2004 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (32) |
CECT 7030 | Diseased eel | Denmark, 2004 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (32) |
95-8-162 | Diseased eel | Denmark, 1995 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (33) |
CECT 4863 | Leg wound | United States | 2 | BT2-SerE | E | 2 | A | 2 | BII (34) |
CECT 897 | Diseased eel | Japan, 1979 | 2 | BT2-SerE | E | 2 | A | 2 | BII (35) |
95-8-161 | Diseased eel | Denmark, 1995 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (36) |
CECT 5343 | Diseased eel | Spain, 2000 | 2 | BT2-nonSerE | E | 2 | A | 2 | BII (36) |
MLT404 | Seawater | United States | 1 | BT1/3 | E | 2 | A | 2 | BII (37) |
CECT 4865 | Diseased shrimp | Taiwan | 2 | BT2-SerE | E | 2 | A | 2 | BII (38) |
CECT 5139 | Diseased eel | Spain, 1998 | 2 | BT2-SerE | E | 2 | A | 2 | BII (38) |
CECT 4866 | Human blood | Australia | 2 | BT2-SerE | E | 2 | A | 2 | BII (39) |
UE516 | Diseased Japanese eel | Taiwan | 2 | BT2-SerE | E | 2 | A | 2 | BII (40) |
94-9-118 | Human disease | Denmark, 1994 | 1 | BT1/3 | E | 2 | A | 2 | B (41) |
534 | Diseased eel | Sweden | 1 | BT1/3 | E | 2 | A | 2 | B (42) |
PD-2-47 | Eel tank water | Spain, 2003 | 2 | BT2-SerE | E | 2 | A | 2 | BIII (43) |
PD-2-51 | Eel tank water | Spain, 2003 | 2 | BT2-SerE | E | 2 | A | 2 | BIII (43) |
CECT 5763 | Eel tank water | Spain, 2002 | 2 | BT2-SerE | E | 2 | A | 2 | BIII (44) |
PD-2-50 | Eel tank water | Spain, 2003 | 2 | BT2-SerE | E | 2 | A | 2 | BIII (45) |
PD-2-55 | Eel tank water | Spain, 2003 | 2 | BT2-SerE | E | 2 | A | 2 | BIII (45) |
Riu-2 | Seawater | Spain, 2003 | 2 | BT2-SerE | E | 2 | A | 2 | BIII (46) |
PD-2-56 | Eel tank water | Spain, 2003 | 2 | BT2-SerE | E | 2 | A | 2 | BIII (47) |
CECT 5166 | Wound infection | United States | 1 | BT1/3 | E | 2 | B | Atypical | NDd |
BT1/3, biotype 1 or 3; BT2-nonSerE, biotype 2 and not serovar E; BT2-SerE, biotype 2 serovar E.
Results of the DNA polymorphism study (see Materials and Methods for details).
See Fig. 2. Rt, ribopattern.
ND, not determined.