TABLE 5.

rF and RF values between any SNP site calculated from the progeny virus genotypes generated after BoHV-1.1 and BoHV-1.2 coinfection^b

Event	Coposition	Distance (kbp)	No. of events		% in the total progenya		%/kb
			r	R	r	R	rF	RF
Within US	US8 × US6	2.67	9	9	3.0	3.0	1.13	1.13
	US6 × US2	3.53	15	15	5.0	5.0	1.43	1.43
	US8 × US2	6.19	22	24	7.4	8.1	1.19	1.30
Within UL	UL0 × UL11	16.18	22	22	7.4	7.4	0.46	0.46
	UL11 × UL27	28.29	37	37	12.4	12.4	0.44	0.44
	UL27 × UL44	38.11	50	50	16.8	16.8	0.44	0.44
	UL0 × UL27	44.47	51	59	17.1	19.8	0.38	0.45
	UL0 × UL44	82.58	69	109	23.2	36.6	0.28	0.44
	UL11 × UL44	66.40	61	87	20.5	29.2	0.31	0.44
Between US and UL	US2 × UL0	15.02	45	45	15.1	15.1	1.01	1.01
	US2 × UL11	31.20	57	67	19.1	22.5	0.61	0.72
	US2 × UL27	59.48	74	104	24.8	34.9	0.42	0.59
	US2 × UL44	97.59	80	154	26.8	51.7	0.28	0.53
	US6 × UL0	18.54	46	60	15.4	20.1	0.83	1.09
	US6 × UL11	34.72	58	82	19.5	27.5	0.56	0.79
	US6 × UL27	63.01	71	119	23.8	39.9	0.38	0.63
	US6 × UL44	101.12	85	169	28.5	56.7	0.28	0.56
	US8 × UL0	21.21	45	69	15.1	23.2	0.71	1.09
	US8 × UL11	37.39	57	91	19.1	30.5	0.51	0.82
	US8 × UL27	65.67	70	128	23.5	43.0	0.36	0.65
	US8 × UL44	103.79	84	178	28.2	59.7	0.27	0.58

^aThe total number of progeny was 298.

^br, recombinant; R, recombination. Values calculated from the number of recombination events are indicated in boldface type.