Skip to main content
. 2009 Jan 30;37(5):e36. doi: 10.1093/nar/gkp034

Figure 3.

Figure 3.

Effect of different parameters and fingerprint error levels on MTP performance for agarose and HICF. Aggregated MTP clone count and gap count are plotted from simulations of rice chr3, human chr21 and fly chr3L (total genomic sequence 95.2 Mb) for 10× clone coverage for HICF (‘×’) and agarose (‘+’). For HICF, the FPC MinOlap parameter was varied from 0 to 10 and the MinShared parameter was varied from 0 to 30, where MinOlap is the minimal amount of overlap between two clones based on FPC coordinates and MinShared is the minimal number of shared bands. For agarose, MinOlap varied from −6 to 10 and MinShared varied from 0 to 12.