Table 2.
Number of relations whose concepts are categorized by the UMLS and the number of inconsistent relations among all. The same results are given for NCIt categorization.
| NCIt relationship | SN relationship | # relations UMLS | Incompatible UMLS | # relations NCIt | Incompatible NCIt |
|---|---|---|---|---|---|
| gene_associated_with_disease | location_of | 1,017 | 0 | 981 | 0 |
| disease_has_abnormal_cell | has_location | 7,085 | 8 | 7,095 | 7 |
| disease_has_finding | has_manifestation | 5,960 | 39 | 5,959 | 2 |
| disease_has_normal_cell_origin | has_location | 5,913 | 0 | 5,821 | 0 |
| disease_has_associated_anatomic_site | has_location / produces | 6,208 | 301 | 6,184 | 0 |
| disease_has_primary_anatomic_site | has_location / produces | 4,831 | 250 | 4,552 | 0 |
| eo_disease_has_associated_eo_anatomy | has_location / produces | 1,313 | 0 | 1,324 | 0 |
| regimen_has_accepted_use_for_disease | treats / result_of | 229 | 0 | 171 | 0 |
| disease_is_stage | has_result | Ø | Ø | 1,043 | 0 |
| disease_is_grade | has_evaluation | Ø | Ø | Ø | Ø |
| eo_disease_has_property_or_attribute | has_property | Ø | Ø | Ø | Ø |