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. 2008 Nov 7;10(6):R130. doi: 10.1186/ar2545

Table 3.

Synthetic peptides for screening T cell epitopes

Peptide number Peptide Synthetic peptide sequence
1 1–20 H-MAALTRDPQFQKLQQWYREH-OH
2 23–42 H-ELNLRRLFDANKDRFNHFSL-OH
3 37–56 H-FNHFSLTLNTNHGHILVDYS-OH
4 51–70 H-ILVDYSKNLVTEDVMRMLVD-OH
5 71–90 H-LAKSRGVEAARERMFNGEKI-OH
6 96–115 H-RAVLHVALRNRSNTPILVDG-OH
7 145–164 H-TGKTITDVINIGIGGSDLGP-OH
8 162–181 H-LGPLMVTEALKPYSSGGPRV-OH
9 168–187 H-TEALKPYSSGGPRVWYVSNI-OH
10 176–195 H-SGGPRVWYVSNIDGTHIAKT-OH
11 191–210 H-HIAKTLAQLNPESSLFIIAS-OH
12 200–219 H-NPESSLFIIASKTFTTQETI-OH
13 225–244 H-AKEWFLQAAKDPSAVAKHFV-OH
14 238–257 H-AVAKHFVALSTNTTKVKEFG-OH
15 247–266 H-STNTTKVKEFGIDPQNMFEF-OH
16 280–299 H-IGLSIALHVGFDNFEQLLSG-OH
17 313–332 H-EKNAPVLLALLGIWYINCFG-OH
18 327–346 H-YINCFGCETHAMLPYDQYLH-OH
19 386–405 H-NGQHAFYQLIHQGTKMIPCD-OH
20 400–419 H-KMIPCDFLIPVQTQHPIRKG-OH
21 420–439 H-LHHKILLANFLAQTEALMRG-OH
22 445–464 H-ARKELQAAGKSPEDLERLLP-OH
23 484–503 H-PFMLGALVAMYEHKIFVQGI-OH
24 533–552 H-AQVTSHDASTNGLINFIKQQ-OH
25 539–558 H-DASTNGLINFIKQQREARVQ-OH

Listed are 25 20-mer unpurified peptides in which each core sequence were centred around. Amino acid residues constituting the core sequence and those thought to bind anchors of I-Aq are underlined and shown in bold letters, respectively.