Table 2.

Single Nucleotide Polymorphisms (SNPs) used in this study. Marker intervals are calculated on the basis of NCBI locations (National Center for Biotechnology Information Web site). SNPs are referred to in this paper by sequential numbers (marker number) reflecting their relative physical map positions. Strand orientation information was obtained from NCBI: “fwd/T” refers to forward or top strand; “rev/B” refers to reverse or bottom strand.

Marker Number	dbSNP rs Number	Alleles	Strand Orientation	Physical Map Location (bp)	Distance (bp) from Previous Marker	SNP Type
1	rs4935774	A/G	rev/B	120826964	---	Upstream of 5′ UTR
2	rs578506	C/G	fwd/T	120828687	1,723	intron
3	rs582446	A/G	rev/B	120833069	4,382	intron
4	rs661057	C/T	fwd/T	120834164	1,095	intron
5	rs11218304	C/T	rev/B	120854321	20,157	intron
6	rs560573	A/T	fwd/T	120866094	11,773	intron
7	rs12364988	A/G	rev/B	120872836	6,742	H269H
8	rs668387	T/C	rev/B	120873131	295	intron
9	rs689021	A/G	rev/B	120876330	3,199	intron
10	rs641120	T/C	fwd/T	120886175	9,845	intron
11	rs4935775	C/A	rev/B	120894712	8,537	intron
12	rs12285364	T/C	fwd/T	120898436	3,724	intron
13	rs2298813	A/G	fwd/T	120898894	458	T528A
14	rs11600231	C/T	fwd/T	120911918	13,024	intron
15	rs2276346	T/G	fwd/T	120919686	7,768	intron
16	SORL1-T833T	T/A	fwd/T	120931165	11,479	T833T
17	rs556349	G/T	rev/B	120931417	252	intron
18	rs11218340	T/A	fwd/T	120936564	5,147	intron
19	rs2070045	G/T	fwd/T	120953300	16,736	S1187S
20	rs3824966	G/C	fwd/T	120953393	93	intron
21	SORL1-ex26	G/C	fwd/T	120959359	5,966	(−18) 5′ of exon 26
22	rs1699102	C/T	fwd/T	120962172	2,813	N1246N
23	rs3824968	T/A	fwd/T	120981132	18,960	A1584A
24	rs2282649	C/T	fwd/T	120984168	3,036	intron
25	rs1010159	C/T	rev/B	120988611	4,443	intron
26	rs1784933	G/A	fwd/T	120994626	6,015	intron
27	rs1614735	C/A	rev/B	120998211	3,585	intron
28	rs1133174	A/G	fwd/T	121006965	8,754	downstream of 3′UTR
29	rs1131497	G/C	fwd/T	121007955	990	downstream of 3′UTR