Table 1.
Characteristics of microsatellite loci
|
Locus name |
Motif |
Linkage groupa |
Map positiona (cM) |
Primer sequences (5'- 3') |
| SSR599 | [TCATTA]2[TCA]6 | 9 | 103.00 | GGATTTCTCATGGAGAATCAGTC |
| TCCCTTGATCTTGATGATGTTG | ||||
| SSR111 | [TC]6[TCTG]6 | 3 | 73.90 | TTCTTCCCTTCCATCAGTTCT |
| TTTGCTGCTATACTGCTGACA | ||||
| SSR14 | [ATA]9 | 3 | 162.50 | TCTGCATCTGGTGAAGCAAG |
| CTGGATTGCCTGGTTGATTT | ||||
| SSR248 | [TA]21 | 10 | 35.00 | GCATTCGCTGTAGCTCGTTT |
| GGGAGCTTCATCATAGTAACG | ||||
| SSR52 | [AAC]9 | 7 | 3.00 | TGATGGCAGCATCGTAGAAG |
| GGTGCGAAGGGATTTACAGA | ||||
| SSR150 | [CTT]7 | 1 | 115.50 | ATGCCTCGCTACCTCCTCTT |
| AATCGTTCGTTCACAAACCC | ||||
| SSR117 | [TC]11 | 1 | 138.00 | AATTCACCTTTCTTCCGTCG |
| GCCCTCGAATCTGGTAGCTT | ||||
| SSR66 | [ATA]8 | 2 | 25.00 | TGCAACAACTGGATAGGTCG |
| TGGATGAAACGGATGTTGAA | ||||
| SSR136 | [CAG]7 | 11 | 11.00 | GAAACCGCCTCTTTCACTTG |
| CAGCAATGATTCCAGCGATA | ||||
| SSR578 | [AAC]6[ATC]5 | 6 | 44.00 | ATTCCCAGCACAACCAGACT |
| GTTGGTGGATGAAATTTGTG | ||||
| SSR47 | [AT]14 | 6 | 6.50 | TCCTCAAGAAATGAAGCTCTGA |
| CCTTGGAGATAACAACCACAA | ||||
| SSR594 | [TCT]8 | 8 | 55.00 | TTCGTTGAAGAAGATGATGGTC |
| CAAAGAGAACAAGCATCCAAGA | ||||
| SSR22 | [AT]11 | 3 | 99.00 | GATCGGCAGTAGGTGCTCTC |
| CAAGAAACACCCATATCCGC | ||||
| SSR327 | [AAT]7 | 8 | 22.50 | TCAGGATCAGGAGCAGGAGT |
| TGGACTTGTTCCATGAACCC | ||||
| SSR593 | [TAC]7 | 4 | 15.00 | TGGCATGAACAACAACCAAT |
| AGGAAGTTGCATTAGGCCAT | ||||
| SSR26 | [CGG]7 | 2 | 77.50 | CGCCTATCGATACCACCACT |
| ATTGATCCGTTTGGTTCTGC | ||||
| SSR45 | [AAT]14 | 7 | 80.00 | TGTATCCTGGTGGACCAATG |
| TCCAAGTATCAGGCACACCA | ||||
| SSR20 | [GAA]8 | 12 | 37.00 | GAGGACGACAACAACAACGA |
| GACATGCCACTTAGATCCACAA | ||||
| SSR70 | [AT]20 | 9 | 42.00 | TTTAGGGTGTCTGTGGGTCC |
| GGAGTGCGCAGAGGATAGAG | ||||
| SSR188 | [AT]11 | 4 | 135.50 | TGCAGTGAGTCTCGATTTGC |
| GGTCTCATTGCAGATAGGGC | ||||
a Linkage group and map position are based on the tomato EXPEN 2000 map http://www.sgn.cornell.edu/.