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. Author manuscript; available in PMC: 2009 Jun 1.
Published in final edited form as: Cancer Res. 2008 Jun 1;68(11):4086–4096. doi: 10.1158/0008-5472.CAN-07-6458

Table 1.

Genes linked to the ECM maintenance and angiogenesis: HT-MT/HT-siRNA, the ratio of gene expression in HT-MT cells versus HT-siRNA cells (P < 0.01)

Accession Gene HT-MT/HT-siRNA
1 NM_022475 Hedgehog interacting protein (HHIP) 7.4
2 NM_005328 Hyaluronan synthase 2 (HAS2) 7.1
3 NM_012098 Angiopoietin-like 2 (ANGPTL2) 7.1
4 NM_001845 Collagen, type IV, alpha 1 (COL4A1) 7.0
5 NM_000362 TIMP metallopeptidase inhibitor 3 (TIMP3) 6.5
6 NM_004004 Gap junction protein, beta 2, 26kDa (GJB2) 6.3
7 NM_000093 Collagen, type V, alpha 1 (COL5A1) 3.9
8 NM_014391 Ankyrin repeat domain 1 (cardiac muscle) (ANKRD1) 3.8
9 NM_182943 Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 (PLOD2) 3.5
10 NM_033140 Caldesmon 1 (CALD1) 3.5
11 NM_004105 EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) 3.4
12 NM_002391 Midkine (neurite growth-promoting factor 2) (MDK) 3.4
13 NM_032048 Elastin microfibril interfacer 2 (EMILIN2) 3.4
16 NM_002290 Laminin, alpha 4 (LAMA4) 3.4
15 NM_032603 Lysyl oxidase-like 3 (LOXL3) 3.3
16 NM_002571 Progestagen-associated endometrial protein
(placental protein 14, pregnancy-associated endometrial
alpha-2-globulin, alpha uterine protein) (PAEP)
3.3
17 NM_130445 Collagen, type XVIII, alpha 1 (COL18A1) 3.1
18 NM_054034 Fibronectin 1 (FN1) 3.0
19 NM_002291 Laminin, beta 1 (LAMB1) 2.7
20 NM_018837 Sulfatase 2 (SULF2) 2.7
21 NM_001530 Hypoxia-inducible factor 1, alpha subunit
(basic helix-loop-helix transcription factor) (HIF-1α)
2.7
22 NM_080591 Prostaglandin-endoperoxide synthase 1 (prostaglandin
G/H synthase and cyclooxygenase) (PTGS1)
2.6
23 NM_001235 Serpin peptidase inhibitor, clade H (heat shock protein 47),
member 1, (collagen binding protein 1) (SERPINH1)
2.3
24 NM_022356 Leucine proline-enriched proteoglycan (leprecan) 1 (LEPRE1) 2.3
25 NM_030583 Matrilin 2 (MATN2) 2.3
26 NM_015103 Plexin D1 (PLXND1) 2.3
27 NM_014918 Carbohydrate (chondroitin) synthase 1 (CHSY1) 2.2
28 NM_001849 Collagen, type VI, alpha 2 (COL6A2) 2.2
29 NM_014584 ERO1-like (S. cerevisiae) (ERO1L) 2.2
30 NM_002546 Tumor necrosis factor receptor superfamily,
member 11b (osteoprotegerin) (TNFRSF11B)
2.2
31 NM_000176 Nuclear receptor subfamily 3, group C,
member 1 (glucocorticoid receptor) (NR3C1)
2.1
32 NM_001848. Collagen, type VI, alpha 1 (COL6A1) 2.0
33 NM_001846 Collagen, type IV, alpha 2 (COL4A2) 2.0