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. 2009 Apr 2;4(4):e5081. doi: 10.1371/journal.pone.0005081

Table 1. Sequences and genomic locations of the probes.

Probe Genomic Location Sequence
1 ChrX: 66,481,078–66,481,135 5′ GGGTTCCCTAAGGGTTGGAGACTTAAGGGTACATAATAATGGGCAGTGG 3′
5′ ATTATGTGGACACCACAATTTGGAAGGGTCTAGATTGGATCTTGCTGGC 3′
2 ChrX: 66,681,149–66,681,198 5′ GGGTTCCCTAAGGGTTGGAGCTTCAGCACTGCAGCCACGACCC 3′
5′ GCCTGGTTAGGCTGCACGCGGAGAGATCTAGATTGGATCTTGCTGGC 3′
3 ChrX: 66,822,629–66,822,690 5′ GGGTTCCCTAAGGGTTGGACCGAAGGAAAAATTGTCCATCTTGTCGTCT 3′
5′ TCGGAAATGTTATGAAGCAGGGATGACTCTGGTCTAGATTGGATCTTGCTGGC 3′
4 ChrX: 66,854,045–66,854,113 5′ GGGTTCCCTAAGGGTTGGAGCTTCCGCAACTTACACGTGGACGACCAGATGGCT 3′
5′ GTCATTCAGTACTCCTGGATGGGGCTCATGGTGTCTAGATTGGATCTTGCTGGC 3′
5 ChrX: 66,858,400–66,858,453 5′ GGGTTCCCTAAGGGTTGGAGTACCGCATGCACAAGTCCCGGATGTA 3′
5′ CAGCCAGTGTGTCCGAATGAGGCACCTTCTAGATTGGATCTTGCTGGC 3′
6 ChrX: 66,860,242–66,860,342 5′ GGGTTCCCTAAGGGTTGGACGAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAATCAAG 3′
5′ TCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCTAGATTGGATCTTGCTGGC 3′
7 Chr16: 3,772,843–3,772,914 5′ GGGTTCCCTAAGGGTTGGACCAGCTAGTGGAATTCAAAACACAATTGGTTCTGTTGGCACA 3′
5′ GGGCAACAGAATGCCACTTCTTTAAGTAACTCTAGATTGGATCTTGCTGGC 3′
8 Chr22: 39,857,407–39,857,482 5′ GGGTTCCCTAAGGGTTGGACCAACCTAAGCACTGTTAGTCAGATTGATCCCAGCTCCAT 3′
5′ GAAAGAGCCTATGCAGCTCTTGGACTACCCTATCATCTAGATTGGATCTTGCTGGC 3′

Listed are the AR exonic and non-coding region probes (1–6), and control probes (7 and 8). Probes 7 and 8 were used as controls to normalize data and were designed in regions with no known CNV. Genomic location data based on human reference sequence (NCBI Build 36.1).