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. 2009 Jan 30;9:26. doi: 10.1186/1471-2148-9-26

Table 3.

Statistical analysis of competitive success of vir9 isolates in the field competition experiments

Source denm. DF MD F Pr > F
Year 1+3–5 1,1 1.13 0.09 0.8072
Cultivar 2+3–5 1,1 10.71 0.88 0.5203
Pair 1+2–5 3,4 47.80 15.57 0.0114
Year*Pair (1) 4 3,3 1.84 3.23 0.1807
Cultivar*Pair (2) 4 3,3 1.45 2.54 0.2321
Year*Cultivar (3) 4 1,3 11.36 19.93 0.0209
Year*Cultivar*Pair (4) 5 3,16 0.57 0.57 0.6438
Residual (5) 16 1.00 - -

Based on a logistic regression, Analysis of Deviance tested for effects of pair (Avir/vir), host cultivar and year on final frequencies of vir9 isolates. Analogous to Analysis of Variance, mean deviances (MD = 2.log-likelihood ratio/DF) were used to calculate quasi-F values. The denominator (denm.) column indicates the error terms used for the F-tests; where necessary, linear combinations of different model factors were made [69]. The DF column indicates the numerator and denominator degrees of freedom. All factors were considered as random effects. Model fitting was analogous to SAS-type II model fitting [68].