Table 2.
Clinical variables of potential relevance in miGEP studies on human tissues
Demographics | Age |
Sex | |
Race | |
Genetic factors | Congenital diseases |
SNPs | |
Non-SNP polymorphisms | |
Mosaicism | |
'Background' comorbidity (chronic) | Sophistication of clinical documentation |
Substance abuse/cigarettes | |
Prescription drugs/supplements | |
Metabolic disease | |
Degenerative processes | |
Major psychiatric disorder(s) | |
Inflammatory/infectious disease | |
Prior sugery/transplant | |
Radiation therapy | |
Body habitus/nutritional status | |
Toxic/environmental exposures | |
Organ function: kidney, liver, lungs, etc. | |
Acute condition | (see above) |
Vascular status (blood pressure problem/shock) | |
External support--respirator, dialysis | |
Metabolic perturbations | |
Acute treatment incl chemotherapy, morphine, etc. | |
State of consciousness incl sleep/wake | |
Trauma | |
Related to death/surgery | Single or multi-factorial |
Biopsy/autopsy confirmed via pathology | |
Anesthesia | |
Preanalytical variables | Post-mortem interval |
Interval prior to freezing/fixative | |
Tissue pH | |
Expertise/number of tissue handler(s) | |
Sophistication of documentation | |
Detailed information regarding anatomy |