TABLE 2.
Evidence for linkage in regions previously reported to harbor IDDM loci
Locus | Chromosome | Defined by marker(s) | Marker tested | LOD | P |
---|---|---|---|---|---|
IDDM1 | 6p21.3 | HLA-DQβ1 | rs1019937 | 213.2 | 8.0 × 10−216 |
IDDM2 | 11p15.5 | INS-VNTR | rs1004446 | 3.09 | 0.00008 |
IDDM3 | 15q26 | D15S107 | rs906310 | 0.00 | 0.6 |
IDDM4 | 11q13 | D11S1917 | rs923346 | 0.87 | 0.02 |
IDDM5 | 6q25 | ESR | rs11902 | 0.00 | 0.5 |
IDDM6 | 18q | D18S64 | rs1943418 | 0.68 | 0.04 |
IDDM7 | 2q31 | D2S152 | rs696092 | 1.91 | 0.002 |
IDDM8 | 6q27 | D6S264 | rs6910121 | 0.45 | 0.07 |
IDDM9 | 3q21-25 | D3S1303 | rs1983380 | 0.40 | 0.09 |
IDDM10 | 10cen | D10S193 | rs959629 | 1.07 | 0.013 |
IDDM11 | 14q24.3 | D14S67 | rs1012921 | 0.13 | 0.2 |
IDDM12 | 2q33 | CTLA4 | rs1947983 | 1.05 | 0.014 |
IDDM13 | 2q34 | IGFBP2 | rs1851328 | 0.63 | 0.04 |
IDDM15 | 6q | D6S283 | rs2207958 | 5.99* | 7.5 × 10−8 |
IDDM16 | 14q32.3 | D14S293 | rs872945 | 0.05 | 0.3 |
IDDM17 | 10q25 | D10S592 | rs151603 | 0.16 | 0.2 |
IDDM18 | 5q33-34 | IL12B | rs270664 | 0.01 | 0.4 |
1q42 | D1S1617 | rs342817 | 0.00 | 0.5 | |
16q22-24 | D16S3098 | rs1037973 | 1.24 | 0.008 |
*Not corrected for allele sharing at IDDM1. Adjustment based upon the expected LOD at D6S283 and the recombination fraction with HLA yields an adjusted LOD of 2.7.