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. 2008 Oct 24;283(43):29206–29214. doi: 10.1074/jbc.M802061200

TABLE 1.

Crystallographic data collection and refinement statistics

Structure TPL-Ala TPL-Met
Space group P21212 P21212
Unit cell parameters
   a (Å) 132.9 132.9
   b (Å) 143.7 143.3
   c (Å) 59.6 59.7
Resolution range (Å) 20.0–1.89 (1.93–1.89)a 30.0–1.95 (2.02–1.95)
No. of unique reflections 89 055 (4 337) 76 260 (6 854)
Rmerge (%)b 7.0 (35.7) 8.2 (42.5)
Average I/σ(I) 12.2 (1.8) 10.5 (2.3)
Data redundancyc 3.7 (2.3) 3.9 (3.6)
Completeness (%) 97.3 (87.5) 90.3 (82.3)
Wilson B-factor (Å2) 18.9 27.1
No. of reflections used in refinement 87 930 (4 337) 75 067 (7 386)
Rcryst (%)d 15.8 (23.2) 15.6 (19.2)
Rfree (%)d 19.8 (30.2) 19.2 (22.7)
No. of reflections used for Rfree 1 065 (52) 1 058 (116)
No. of protein residues 912 912
No. of water molecules 966 887
No. of ligands 6 (2 K+, 2 alanine quinonoid molecules, 2 PEG fragments) 6 (2 K+, 1 methionine quinonoid molecule, 1 PLP, 2 PEG fragments)
Average B-factor (Å2)
   Chain A 17.2 32.0
   Chain B 14.3 29.5
   Water molecules 29.6 41.2
   Overall 17.4 32.0
R.m.s. deviationse
   Bond lengths (Å) 0.016 (0.022) 0.015 (0.022)
   Bond angles (°) 1.4 (2.0) 1.4 (2.0)
Ramachandran plot (%)f
   Favored 98.1 97.9
   Outliers 0.0 0.0
a

Values in parentheses are for the outer resolution shell

b

The value of the merging R-factor between equivalent measurements of the same reflection, Rmerge = (ΣhklΣi|<Ihkl> – Ihkl, i|)/(ΣhklΣi Ihkl, i)

c

The average observation of the same reflection

d

Crystallographic R-factors, R = (Σhkl||Fo, hkl| – |Fc, hkl||)/(Σhkl Fo, hkl|)

e

Target values are given in parentheses

f

Analyzed by MolProbity (30)