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. Author manuscript; available in PMC: 2009 Mar 30.
Published in final edited form as: Cancer Res. 2008 May 1;68(9):3532–3539. doi: 10.1158/0008-5472.CAN-07-6471

Table 5.

Risk of SCC, adenocarcinoma of the cervix, and squamous cell vulvar cancer associated with selected class I and II multilocus genotypes

Controls
(N=502)
SCC Cervix
(n=490)
Adenocarcinoma
(n=537)
Controls2
N=637)
SCC Vulvar
(n=424)
n (%) n (%) OR1 (95% CI) n (%) OR1 (95% CI) n (%) n (%) OR1 (95% CI)
B*4402-DRB1*1101-DQB1*0301
X-X-X 312 (62.0) 253 (52.0) ref 309 (57.5) ref 380 (59.7) 224 (52.8) ref
4402-X-X 35 (7.0) 38 (7.8) 1.4 (0.9-2.3) 43 (8.0) 1.3 (0.8-2.0) 46 (7.2) 23 (5.4) 0.8 (0.5-1.4)
X-1101-X 3 (0.6) 0 (0.0) -- 1 (0.2) 0.3 (0.0-2.7) 5 (0.8) 1 (0.2) 0.4 (0.0-3.1)
X-X-0301 92 (18.3) 91 (18.7) 1.2 (0.9-1.7) 100 (18.6) 1.1 (0.8-1.5) 112 (17.6) 56 (13.2) 0.8 (0.6-1.2)
4402-1101-X 0 (0.0) 1 (0.2) -- 0 (0.0) 0 (0.0) 0 (0.0)
4402-X-0301 32 (6.4) 45 (9.2) 1.8 (1.1-3.0)* 37 (6.9) 1.2 (0.7-2.0) 47 (7.4) 40 (9.4) 1.4 (0.9-2.3)
X-1101-0301 26 (5.2) 31 (6.4) 1.5 (0.8-2.5) 33 (6.1) 1.3 (0.8-2.2) 39 (6.1) 58 (13.7) 2.5 (1.6-3.9)*
4402-1101-0301 3 (0.6) 28 (5.7) 11.5 (3.5-38.5)* 14 (2.6) 4.9 (1.4-17.2)* 8 (1.3) 22 (5.2) 4.7 (2.0-10.7)*
B*0702-Cw*0702-DQB1*0301
X-X-X 237 (47.1) 201 (41.0) ref 225 (41.9) ref 296 (46.5) 161 (38.0) ref
0702-X-X 2 (0.4) 0 (0.0) -- 2 (0.4) 1.1 (0.2-7.9) 3 (0.5) 3 (0.7) 1.8 (0.4-9.2)
X-0702-X 10 (2.0) 11 (2.2) 0.9 (0.4-2.3) 11 (2.0) 1.1 (0.4-2.6) 15 (2.4) 4 (0.9) 0.5 (0.2-1.5)
X-X-0301 125 (24.9) 132 (26.9) 1.3 (0.9-1.7) 140 (26.1) 1.2 (0.9-1.6) 167 (26.2) 126 (29.7) 1.4 (1.0-1.9)
0702-0702-X 101 (20.1) 82 (16.7) 1.0 (0.7-1.4) 115 (21.4) 1.2 (0.9-1.7) 117 (18.4) 80 (18.9) 1.3 (0.9-1.8)
0702-X-0301 0 (0.0) 5 (1.0) -- 1 (0.2) -- 1 (0.2) 0 (0.0) --
X-0702-0301 4 (0.8) 6 (1.2) 1.2 (0.3-4.4) 6 (1.1) 1.3 (0.3-4.7) 5 (0.8) 0 (0.0) --
0702-0702-0301 24 (4.8) 53 (10.8) 2.7 (1.6-4.6)* 37 (6.9) 1.7 (1.0-2.9) 33 (5.2) 50 (11.8) 2.8 (1.7-4.5)*
B*0801-DRB1*0301-DQB1*0201
X-X-X 346 (69.9) 379 (77.8) ref 396 (74.0) ref 450 (71.2) 321 (76.4) ref
0801-X-X 25 (5.1) 15 (3.1) 0.6 (0.3-1.1) 21 (3.9) 0.7 (0.4-1.4) 30 (4.7) 23 (5.5) 1.1 (0.6-1.9)
X-0301-X 0 (0.0) 0 (0.0) -- 0 (0.0) 0 (0.0) 0 (0.0)
X-X-0201 0 (0.0) 0 (0.0) -- 0 (0.0) 0 (0.0) 0 (0.0)
0801-0301-X 1 (0.2) 1 (0.2) 0.7 (0.0-11.3) 0 (0.0) 1 (0.2) 1 (0.2) 1.4 (0.1-22.2)
0801-X-0201 0 (0.0) 0 (0.0) -- 0 (0.0) 0 (0.0) 0 (0.0)
X-0301-0201 29 (5.9) 16 (3.3) 0.5 (0.3-1.0) 26 (4.9) 0.8 (0.5-1.4) 36 (5.7) 23 (5.5) 0.9 (0.5-1.5)
0801-0301-0201 97 (19.6) 73 (15.0) 0.7 (0.5-1.0) 92 (17.2) 0.8 (0.6-1.2) 115 (18.2) 52 (12.4) 0.6 (0.4-0.9)
DRB1*13-DQB1*06
X-X 60 (10.1) 61 (16.1) ref 58 12.7 ref 70 (11.7) 54 (14.2) ref
DRB1*13-X 2 (0.3) 0 (0.0) 0 0 3 (0.5) 0 (0.0)
X-DQB1*06 77 (12.9) 71 (18.7) 0.9 (0.6-1.4) 77 16.8 1.1 (0.7-1.7) 84 (14.1) 73 (19.3) 1.1 (0.7-1.8)
X-DQB1*0301 71 (11.9) 101 (26.6) 1.4 (0.9-2.2) 87 19 1.2 (0.8-2.0) 91 (15.2) 68 (17.9) 1.0 (0.6-1.5)
X-DQB1*0302 56 (9.4) 50 (13.2) 0.9 (0.5-1.5) 52 11.4 1.0 (0.6-1.7) 65 (10.9) 46 (12.1) 0.9 (0.5-1.5)
X-DQB1*0501 44 (7.4) 38 (10.0) 0.9 (0.5-1.5) 47 10.3 1.1 (0.6-1.9) 54 (9.0) 14 (3.7) 0.3 (0.2-0.7)*
DRB1*13-DQB1*06 61 (10.2) 34 (9.0) 0.6 (0.3-1.0) 35 7.6 0.6 (0.3-1.0) 77 (12.9) 25 (6.6) 0.4 (0.2-0.7)*
DRB1*13-DQB1*0301 7 (1.2) 9 (2.4) 1.4 (0.5-3.9) 2 0.4 0.3 (0.1-1.6) 7 (1.2) 7 (1.8) 1.3 (0.4-3.9)
DRB1*13-DQB1*0302 1 (0.2) 1 (0.3) 0.7 (0.0-12.2) 0 0 1 (0.2) 0 (0.0)
DRB1*13-DQB1*0501 0 (0.0) 0 (0.0) 1 0.2 0 (0.0) (0.0)
DRB1*13-DQB1*06/*0301 52 (8.7) 56 (14.8) 1.1 (0.6-1.8) 37 8.1 0.8 (0.4-1.3) 70 (11.7) 58 (15.3) 1.1 (0.6-1.7)
DRB1*13-DQB1*06/*0302 30 (5.0) 29 (7.7) 1.0 (0.5-1.8) 37 8.1 1.3 (0.7-2.4) 42 (7.0) 23 (6.1) 0.7 (0.4-1.3)
DRB1*13-DQB1*06/*0501 23 (3.9) 24 (6.3) 1.0 (0.5-2.1) 25 5.5 1.2 (0.6-2.3) 33 (5.5) 11 (2.9) 0.4 (0.2-0.9)
1

Odds ratios are adjusted for race. Bolding represents significant associations, although rounding sometimes caused confidence intervals to include 1.0.

2

Controls for the vulvar cancer study include women with a history of hysterectomy.

*

Holm test p-value < 0.05, result is significant after adjusting for multiple comparisons.