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. 2009 Mar 6;9:12. doi: 10.1186/1472-6807-9-12

Table 2.

Cα RMSD of MCORE and other Models compared to the native structure for a set of 1364 proteins in terms of RMSD, TM-SCORE and percentage of atoms in the clashes2.

Methods Average Std. Dev
RMSD(Å) COMBO 3.28 1.39
PULCHRA 3.35 1.77
CLOSC 3.55 1.49
MCORE 3.36 1.42
MCORE-L 3.35 1.41
Methods Average Std. Dev
TM-Score COMBO 0.743 0.13
PULCHRA 0.746 0.13
CLOSC 0.719 0.13
MCORE 0.744 0.13
MCORE-L 0.746 0.13
Methods Average Std. Dev
Clashes <1.9 COMBO 4.50 10.01
PULCHRA 0.05 0.4
CLOSC 0 0
MCORE 0 0
MCORE-L 0 0
Methods Average Std. Dev
Clashes <3.6 COMBO 63.40 18.67
PULCHRA 3.64 12.00
CLOSC 0.00 0
MCORE 1.09 3.69
MCORE-L 1.20 4.02

2 The corresponding standard deviation values are also provided.

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