Table 1.
Affymetrix 10K Xba142 DNA chip SNP call analysis
| Sample | F-G | M-G | S-G | D-G | Average |
| % SNP Call | 93.4 | 97.2 | 94.7 | 95.2 | 95.1 |
| Sample | F-K30 | M-K30 | S-K30 | D-K30 | Average |
| % SNP Call | 96.3 | 97.7 | 96.5 | 95.5 | 96.5 |
| Sample | F-K40 | M-K40 | S-K40 | D-K40 | Average |
| % SNP Call | 97.5 | 95.1 | 96.8 | 95.6 | 96.3 |
| Sample | F-W30 | M-W30 | S-W30 | D-W30 | Average |
| % SNP Call | 97.7 | 97.7 | 94.7 | 97.4 | 96.9 |
| Sample | F-W40 | M-W40 | S-W40 | D-W40 | Average |
| % SNP Call | 95.5 | 95.8 | 96.4 | 92.5 | 95.0 |
Percent call rates for gDNA and MDA samples are shown. Samples belong to one family including: Father (F), Mother (M), Son (S), and Daughter (D). G represents unamplified gDNA. K30 and K40 represent MDA reactions using Repli-g kit at 30°C and 40°C, respectively); W30 and W40 represent MDA reactions using GGGCAGGA*N*G primer at 30°C and 40°C, respectively.