Table 4. “Jackknifing” the HML HMM: Removing one group of the training set and detecting the group removed in chromosome 19.

Model	no_hml1	no_hml2	no_hml3	no_hml4	no_hml5	no_hml6	no_hml7	no_hml8	no_hml9	no_hml10
# match states	130	170	110	130	110	110	130	110	210	170
Threshold	5	5	6	5	5	5	6	5	6	5
Sensitivity (including removed group) (%)	60	87	62	78	70	82	80	74	87	87
Specificity (%)	91	96	93	95	91	91	91	93	86	91
% detection of removed hml group	52	88	6	83	0	59	71	23	67	67