Table 1.
Sequence of the primers used for the first PCR in the single-cell multiplex reverse transcription-PCR protocol
First primer pair |
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Sense PCR primers |
Antisense PCR primers |
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Gene | Position | Sequence | Position | Sequence | PCR product |
TrkB | 916–935 | ACTGTGAGAGGCAACCCCAA | 1327–1346 | ATCACCAGCAGGCAGAATCC | 431 |
p75 | 151–170 | GGAGCCAACCAGACCGTGTG | 410–431 | TCTGGGCACTCTTCACACACTG | 280 |
BDNF | 370–389 | ATGTCTATGAGGGTTCGGCG | 606–625 | GCGAGTTCCAGTGCCTTTTG | 256 |
VGlut2 | 316–335 | CGCGGAGGCAAAGTTATCAA | 805–828 | TCTGTAATGGTAGGATGCTTTGC | 513 |
NK1R | 34–53 | TTCCCCAACACCTCCACCAA | 455–474 | AGCCAGGACCCAGATGACAA | 441 |
Mu-R | 75–94 | ACCTGGCTCCTGGCTCAACT | 290–310 | TGGTGGCAGTCTTCATTTTGG | 236 |
HCN1 | 1642–1663 | TGTCGTCTTTACTCCCTTTCGG | 1956–1975 | CGGTGTAGACTGGCGGAGAT | 334 |
HCN2 | 1698–1718 | CAAGGGCAACAAGGAGATGAA | 2056–2073 | TGGCGGTGGTGGGAAGAG | 376 |
HCN3 | 1530–1549 | TTGTCGCCTCTACTCGCTCA | 1902–1921 | GGAGGGTGGCTGGAGAATCA | 392 |
HCN4 | 24–43 | CCGCTATCAAAGTGGAGGGA | 265–284 | TCAGCAACAGCATCGTCAGG | 261 |
Intron | 8–27 | CTGTCCCCCTTACGAATCCC | 228–247 | CCAGCACCAGGGATAGAGCC | 220 |
The primers are designed from 5′ to 3′. Position 1 corresponds to the ATG codon.