Table 2.
Sequence of the primers used for the second PCR in the single-cell multiplex reverse transcription-PCR protocol
Second primer pair |
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Sense PCR primers |
Antisense PCR primers |
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Gene | Position | Sequence | Position | Sequence | PCR product |
TrkB | 941–962 | CGCTTCAGTGGTTCTACAATGG | 1265–1284 | CTCCCGATTGCTTTGGTCAG | 344 |
p75 | 161–180 | AGACCGTGTGTGAACCCTGC | 364–381 | GAGTCCTGAGCCCACCCC | 221 |
BDNF | 445–464 | TGGGTCACAGCGGCAGATAA | 575–595 | TGCAGCCTTCCTTGGTGTAAC | 151 |
VGlut2 | 362–379 | CCGAGACCGTGGGGATGA | 773–796 | CATAAGACACCAGAAGCCAGAACA | 435 |
NK1R | 123–142 | CATCGTGGTGACTTCCGTGG | 397–416 | TGAAGAGGGTGGATGATGGC | 294 |
Mu-R | 196–216 | GTCACAGCCATCACCATCATG | 287–310 | TGGTGGCAGTCTTCATTTTGGTAT | 115 |
HCN1 | 1711–1734 | GCCTTTGAGACAGTTGCTATTGAC | 1872–1895 | TGAGGATAGTTGATTGGAGGGATA | 185 |
HCN2 | 1830–1849 | TTTCAACGAGGTGCTGGAGG | 1968–1987 | TGGCATTCTCCTGGTTGTTG | 158 |
HCN3 | 1564–1583 | AATGCGGTGCTTGAGGAGTT | 1885–1902 | AGGGGAGAGGGGCAGAGG | 339 |
HCN4 | 24–43 | CCGCTATCAAAGTGGAGGGA | 254–275 | GCATCGTCAGGTCCCAGTAAAA | 252 |
Intron | 16–35 | CTTACGAATCCCCCAGCCTT | 178–197 | TTGAAAGCCAGGGAGGAACT | 182 |
The primers are designed from 5′ to 3′. Position 1 corresponds to the ATG codon.