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. Author manuscript; available in PMC: 2009 Apr 2.
Published in final edited form as: Eur J Neurosci. 2008 Aug;28(3):510–520. doi: 10.1111/j.1460-9568.2008.06345.x

Table 2.

Sequence of the primers used for the second PCR in the single-cell multiplex reverse transcription-PCR protocol

Second primer pair
Sense PCR primers
Antisense PCR primers
Gene Position Sequence Position Sequence PCR product
TrkB 941–962 CGCTTCAGTGGTTCTACAATGG 1265–1284 CTCCCGATTGCTTTGGTCAG 344
p75 161–180 AGACCGTGTGTGAACCCTGC 364–381 GAGTCCTGAGCCCACCCC 221
BDNF 445–464 TGGGTCACAGCGGCAGATAA 575–595 TGCAGCCTTCCTTGGTGTAAC 151
VGlut2 362–379 CCGAGACCGTGGGGATGA 773–796 CATAAGACACCAGAAGCCAGAACA 435
NK1R 123–142 CATCGTGGTGACTTCCGTGG 397–416 TGAAGAGGGTGGATGATGGC 294
Mu-R 196–216 GTCACAGCCATCACCATCATG 287–310 TGGTGGCAGTCTTCATTTTGGTAT 115
HCN1 1711–1734 GCCTTTGAGACAGTTGCTATTGAC 1872–1895 TGAGGATAGTTGATTGGAGGGATA 185
HCN2 1830–1849 TTTCAACGAGGTGCTGGAGG 1968–1987 TGGCATTCTCCTGGTTGTTG 158
HCN3 1564–1583 AATGCGGTGCTTGAGGAGTT 1885–1902 AGGGGAGAGGGGCAGAGG 339
HCN4 24–43 CCGCTATCAAAGTGGAGGGA 254–275 GCATCGTCAGGTCCCAGTAAAA 252
Intron 16–35 CTTACGAATCCCCCAGCCTT 178–197 TTGAAAGCCAGGGAGGAACT 182

The primers are designed from 5′ to 3′. Position 1 corresponds to the ATG codon.

HHS Vulnerability Disclosure