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. 2009 Apr 10;284(15):10181–10189. doi: 10.1074/jbc.M807799200

TABLE 2.

Interaction between YesW and Rha

Sugar
Hydrogen bond (<3.4 Å)
C-C contact (<4.5 Å)
Atom Protein Atom Distance Atom Protein Atom(s)
Å
RA1 O-1 Wat951 2.6 C-1 Tyr595 C∈ 1
Wat678 2.8 C-2 Tyr595 C∈ 1, Cζ
O-2 Tyr595 3.0 Lys535 C∈, Cγ
Wat658 3.0 C-3 Lys535 C∈, Cγ
Wat682 3.0 Asn532 C
O-3 Thr534 Oγ1 2.8 C-4 Gly533
O-4 Thr534 N 3.0 C-5 Asn532 C
Wat797 2.7
O-5 Wat825 2.7
Wat682 3.3
RA2 O-1 Wat1097 2.6 C-1 Gly533
Wat1193 2.7 Asn532 C
O-2 Wat951 3.0 C-2 Asn532
O-3 Asn152 Oδ1 3.1 C-3 Asn532
Asp172 Oδ2 2.7 C-4 Asn532 C, Cα
Wat852 3.1 Asn531 C, Cα
O-4 Asn532 N 3.1 C-5 Gly533
Wat711 2.7 Asn532 C, Cα
O-5 Gly533 N 3.0
RA3 O-1 Asp187 Oδ1 2.7 C-1 Asp187
Oδ2 3.3 C-2 Lys207 C∈
Wat918 3.3 C-3 Lys207 C∈
Wat828 3.0 C-4 Arg255
O-3 Wat1015 2.9 C-6 Thr141 Cα, Cζ
Wat1056 2.9 Tyr147 C∈ 2
O-4 Arg255 Nη 1 2.8 Gly186
Wat1056 3.2
Wat714 2.7
O-5 Wat1070 2.8
RA4 O-2 Lys207 2.9 C-3 Val246 Cγ 1, Cγ 2
O-3 Gly238 O 2.6 Gly238
Wat828 2.8 C-5 Val246 Cγ 2
Wat831 3.2 C-6 Lys240 C∈
O-4 Wat831 2.8