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. Author manuscript; available in PMC: 2009 Nov 27.
Published in final edited form as: J Phys Chem B. 2008 Nov 27;112(47):15227–15243. doi: 10.1021/jp806814s

Figure 4.

Figure 4

Plots showing glycosidic (“chi”) and pseudorotation (“P”) angles changes in time [(a), (c)] in comparison with the configurations observed in MD trajectories [(b), (d)]. Black frames in plots (a) and (c) indicate the period in the simulation when the configurations presented in figures (b) and (d) were observed. Correct ranges of parameters for a base inside the helix are P ≈ 18° and χ ∈ {[–180; –90] ∪ [90; 180]}°.