. Author manuscript; available in PMC: 2009 Sep 20.

Published in final edited form as: J Chem Theory Comput. 2008 Sep 20;4(10):1757–1767. doi: 10.1021/ct800223g

Table 3.

Root mean square error for mean square fluctuations between the partial structure and the corresponding parts in the structure after removing two terminal residues in the subunit S6 in the slowest mode

Removed chain	Corresponding subunit	RMSE for MSF
B	S2	28.65*
C	S3	6.44
D	S4	12.87
E	S5	17.26
F	S6	2.86
G	S7	14.89
H	S8	28.59*
I	S9	5.77
J	S10	2.76
K	S11	12.54
L	S12	9.05
M	S13	7.78
N	S14	43.46*
O	S15	0.63
P	S16	8.44
Q	S17	25.39*
R	S18	2.97**
S	S19	6.77
T	S20	3.80
V	THX	0.74