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. Author manuscript; available in PMC: 2009 Sep 20.
Published in final edited form as: J Chem Theory Comput. 2008 Sep 20;4(10):1757–1767. doi: 10.1021/ct800223g

Table 6.

Root-mean-square error for deformation energies between the partial structure and the corresponding parts in the complete structure after removing S18 involved pairs of proteins in the slowest mode.

Removed chains Corresponding subunits RMSE for Deformation Energy
BR S2-S18 3.89e-05
CR S3- S18 5.31e-06**
DR S4- S18 4.16e-05
ER S5- S18 3.90e-05
FR S6- S18 7.70e-07**
GR S7-S18 4.06e-05
HR S8- S18 4.07e-05
IR S9- S18 4.18e-05
JR S10- S18 4.17e-05
KR S11- S18 4.15e-05
LR S12- S18 4.15e-05
MR S13- S18 4.19e-05
NR S14- S18 4.03e-05
OR S15- S18 4.12e-05
PR S16- S18 4.16e-05
QR S17- S18 4.16e-05
RS S18- S19 4.17e-05
RT S18- S20 4.17e-05
RV S18- THX 4.14e-05