TABLE 5.
Association studies with plasma Lp(a) levels in the CLEAR cohort
A |
Genotype versus Lp(a) Levels |
Genotype versus Carotid Artery Disease |
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---|---|---|---|---|---|---|---|
Gene | rs Number | MAF | HW P | B | P Value | B | P Value |
TIAM2 | rs9384296 | 0.15 | 0.80 | 0.164 | 0.122 | 0.8597 | 0.299 |
ARID1B | rs6917698 | 0.22 | 0.22 | 0.063 | 0.506 | 0.9225 | 0.531 |
SYTL3 | rs9364496 | 0.25 | 0.80 | 0.103 | 0.237 | 1.0110 | 0.926 |
IGF2R | rs8191829 | 0.23 | 0.72 | −0.086 | 0.337 | 1.2780 | 0.0438 |
LPA | rs6919346 | 0.16 | 0.40 | −0.663 | 3.83 × 10−11 | 0.6619 | 0.0036 |
PLG | rs14224 | 0.41 | 0.21 | 0.219 | 0.0036 | 0.9697 | 0.767 |
PARK2 |
rs2022991 |
0.33 |
0.83 |
−0.026 |
0.748 |
0.7488 |
0.009 |
B |
Genotype versus Isoform Size |
Genotype versus Lp(a) |
Genotype versus Lp(a) with Covariate (Isoform Size) |
||||
Gene |
rs Number |
B |
P Value |
B |
P Value |
B |
P Value |
TIAM2 | rs9384296 | 1.329 | 0.213 | −0.082 | 0.797 | 0.164 | 0.509 |
ARID1B | rs6917698 | 0.248 | 0.815 | −0.238 | 0.470 | −0.180 | 0.482 |
SYTL3 | rs9364496 | −0.183 | 0.872 | 0.296 | 0.399 | 0.197 | 0.273 |
IGF2R | rs8191829 | 1.514 | 0.143 | −0.335 | 0.306 | −0.151 | 0.553 |
LPA | rs6919346 | 0.959 | 0.376 | −0.981 | 0.002 | −0.877 | 0.0004 |
PLG | rs14224 | −2.405 | 0.0045 | 0.676 | 0.0097 | 0.270 | 0.205 |
PARK2 | rs2022991 | 1.003 | 0.276 | −0.136 | 0.635 | 0.102 | 0.644 |
A: Analyses in 1,054 subjects with Lp(a) measurements, including 306 cases (with carotid artery disease) and 534 controls (Table 4). B: Analyses in 99 individuals selected for isoform size studies. Last two columns are analyses adjusted for isoform size. MAF, minor allele frequency; HW P, Hardy-Weinberg P value; B, regression slope coefficient. Significant P values are shown in bold italic.