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. 2009 May;50(5):977–987. doi: 10.1194/jlr.M800645-JLR200

TABLE 2.

Liver microarray data: LD

Gene Name Gene Description Accession Number Ratioa qRT-PCR P
BA synthesis, transport, and metabolism
Cyp7a1 Cholesterol 7α-hydroxylase NM_007824 0.21 0.43 *
Cyp27a1 Sterol 27-hydroxylase NM_024264 0.97 1.03
Cyp8b1 Sterol 12α-hydroxylase NM_010012 0.27 0.14
Bsep/Abcb11 Bile salt export pump NM_021022 1.80 1.01
Ntcp Na+-taurocholate cotransporting protein NM_011387 1.20 0.85
Oatp4 Organic anion transporter, 1b2 NM_178235 1.60 1.14
Oatp2 Organic anion transporter, 1a4 NM_030687 2.00 1.51 *
Ostb Organic solute transporter β NM_178933 2.00 2.49 **
Mdr3/Abcb4 ATP binding cassette, B4 NM_008830 2.80 1.41 *
Mrp2/Abcc2 ATP binding cassette, C2 NM_013806 1.30 0.92
Cyp2b10 Cytochrome P450, 2b10 NM_009998 0.82
Cyp3a11 Cytochrome P450, 3a11 NM_007818 3.00
Cholesterol synthesis, esterification, and transport
Hmgcr HMG-CoA reductase NM_008255 1.60 1.53 *
Abca1 ATP binding cassette, A1 NM_013454 1.80 1.28 *
Abcg5 ATP binding cassette, G5 NM_031884 1.90 1.07
Abcg8 ATP binding cassette, G8 NM_026180 1.20 1.31
Abcg1 ATP binding cassette, G1 NM_009593 0.70 0.50 **
Acat1 Acetyl-CoA acetyltransferase 1 NM_009230 0.43 0.29 **
Acat2 Acetyl-CoA acetyltransferase 2 NM_146064 1.25 1.42
Cd36 FA translocase NM_007643 0.85 0.84
Srb1 Scavenger receptor class, B1 NM_016741 1.20 0.83
Scp2 Sterol carrier protein 2, liver NM_011327 1.29 0.93
CAV1 Caveolin 1 NM_007616 1.00
NPC1 Niemann pick type C1 NM_008720 1.27
StarD4 StAR-related lipid transfer domain containing 4 NM_133774 2.00 1.48
Transcription factors or nuclear receptors
Lxrα Liver X receptor NM_013839 1.00 0.77
Fxr Farnesoid X receptor NM_009108 1.50 0.95
Shp Small heterodimer partner NM_011850 1.60 1.28
Pparα Peroxisome proliferator activated receptor α NM_011144 1.60 1.54 *
Srebp1 Sterol regulatory element binding protein 1 NM_011480 2.50 2.36 *
Srebp2 Sterol regulatory element binding protein 2 NM_033218 0.90 0.86
Rxr Retinoid X receptor, α NM_011305 1.60 1.14
FgfR4 Fibroblast growth factor receptor 4 AF127140 1.10 1.11
Hnf4a Hepatic nuclear factor 4, α NM_008261 1.50 1.03
FA synthesis and oxidation
Fasn Fatty acid synthase NM_007988 5.40 3.80 *
Ucp2 Uncoupling protein 2 NM_011671 0.83
Scd1 Stearoyl-CoA desaturase 1 NM_009127 3.40 0.93
Scd2 Stearoyl-CoA desaturase 2 NM_009128 0.80
Acaa1 Acetyl-CoAacyltransferase 1 NM_130864 2.19 5.62 *
Acadl Acyl-CoA dehydrogenase, long chain NM_007381 2.13 1.61
Acot1 Acyl-CoA thioesterase 1 NM_012006 9.33 4.85 **
Lipoprotein metabolism
apoB Apolipoprotein B XM_137955 1.13
apoA4 Apolipoprotein A-IV NM_007468 2.00 1.94 *
apoC3 Apolipoprotein C-III NM_023114 1.80
apoC2 Apolipoprotein C-II NM_009695 1.90
Ldlr LDL receptor NM_010700 1.40 1.70
Vldlr VLDL receptor NM_013703 1.60 1.30
ApoA1 Apolipoprotein A NM_009692 1.70 1.12
apoE Apolipoprotein E NM_009696 1.70 0.92
apoA5 Apolipoprotein A-V NM_080434 1.30 1.93
Mttp Microsomal TG transfer protein NM_008624 1.40 2.06 **
others
Cyp4a14 Cytochrome P450, 4A14 NM_007822 34.40 26.55 **

Relative expression of some genes was confirmed by real time qRT-PCR by individual samples (four mice per group). qRT-PCR results were expressed as a fold change normalized to the wild-type control. *P < 0.05; **P < 0.01.

a

Microarray data are expressed as an expression ratio of L-Fabp−/− versus the wild type.