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. 2009 Apr;181(4):1399–1413. doi: 10.1534/genetics.108.097238

TABLE 2.

Diversity statistics at silent sites for all loci in parviglumis

Locus bp n S η1 H θπ D RM ρ
adh1 808 8 57 27 0.964 0.026 −0.224 5 0.018
asg11 395 6 10 9 1.000 0.009 −1.069 0 0.001
asg35 467 12 31 19 0.985 0.016 −1.327 3 0.041
asg64 509 16 27 21 1.000 0.010 −1.505 1 0.058
asg65 531 14 20 4 0.912 0.013 0.297 2 0.005
bnl7-13 758 12 26 7 0.955 0.012 0.061 0 0.000
bz2 205 12 10 4 0.909 0.015 −0.255 1 0.037
c1 440 11 20 3 0.909 0.018 0.633 3 0.000
csu1132 330 8 28 16 0.964 0.029 −0.548 3 0.013
csu1138 186 14 5 1 0.835 0.012 1.547 1 0.047
csu1171 466 9 18 11 0.972 0.012 −0.869 1 0.010
csu381 916 10 42 24 1.000 0.014 −0.561 4 0.020
csu636 643 15 16 6 0.952 0.008 0.275 0 0.000
csu838 257 13 15 10 0.962 0.013 −1.186 2 0.120
d8 206 13 37 30 1.000 0.036 −1.677 2 0.000
fus6 153 10 4 2 0.644 0.010 0.143 0 0.000
gl1510 484 15 12 5 0.933 0.007 −0.437 2 0.137
glb1 511 8 52 37 1.000 0.033 −0.878 6 0.033
mgs3020 179 14 10 5 0.879 0.012 −1.254 2 0.483
pepc1070 712 13 63 22 1.000 0.029 0.098 8 0.016
pepc1150 233 16 15 8 0.883 0.015 −0.870 2 0.086
tb1 1982 7 79 49 0.952 0.015 −0.578 7 0.007
ts2 301 10 13 3 1.000 0.018 0.841 4 0.168
vp1010 167 12 9 4 0.803 0.017 −0.179 0 0.032
wip1 232 15 20 8 0.933 0.026 −0.088 4 0.060
wx1 497 19 29 14 0.994 0.013 −0.839 6 0.138

bp, number of silent sites; n, sample size; S, segregating sites; η1, number of singletons; H, haplotype diversity; θπ, nucleotide diversity per base pair; D, Tajima's D; RM, minimum number of recombination events; ρ, recombination rate per base pair.