TABLE 2.
Prediction patterns with multiple sweep windows
| No. of sweep windows
|
|||
|---|---|---|---|
| 1 | 2 | ≥3 | |
| Proportion | 0.79 | 0.19 | 0.02 |
| Average length of the largest sweep window (kb) | 4.60 | 4.16 | 4.53 |
| Average length of the second largest sweep window (kb) | — | 1.54 | 2.35 |
| Average length of the third largest sweep window (kb) | — | — | 1.31 |
| Largest distance from a sweep window to the selected site (kb)a | 0.92 | 6.78 | 16.47 |
| Distance from the largest sweep window to the selected site (kb)a | 0.92 | 1.11 | 1.62 |
| Proportion of the largest sweep windows that include the selected site | 0.97 | 0.92 | 0.89 |
Detailed results obtained with HMMA (three-state model) for the sweep scenario of Table 1 with α = 300 are shown. Averages over the replicates where at least one sweep window was detected are displayed.
a
Computed from the center of the sweep window.