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EST-derived microsatellites and SNPs and their performance in genotyping analysis
| Category | Microsatellites | SNPs |
|---|---|---|
| Total no. of markers | 992 | 384 |
| Duplicated EST contigs | 9 | 0 |
| No. of failed markers | 450 | 118 |
| Nonpolymorphic markers | 120 | 143 |
| Markers not scored due to gene duplication | 103 | 0 |
| Validated in mapping family | 310 | 125 |
| Over five parent–parent–children genotyping errors | NA | 27 |
| Markers used for linkage mapping analysis | 310 | 98 |
NA, not applicable.
