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Alignment extract showing the region around the 5' end of fijivirus ORF5-2. The high nucleotide conservation in row 1 (mostly '*'s, only 2 'X's) can potentially be a result of amino acid constraints on the protein encoded by ORF5-1. In contrast, the high nucleotide conservation from the middle of row 3 to the end of the alignment extract is indicative of overlapping features (many 'X's).
