Table 1.

Genetic models for simulating risk SNPs for case control data.

		Allele	Marginal GRR		Penetrance Factors			K	λs	# Kept
Model	Number	Frequency	Het	Hom	0	1	2
H1M1	1	0.03	∞	∞	0	0.9	0.9	0.05	9	K1S1
H2M3	6	0.125	5.22	5.22	0	0.9	0.9	0.02	9	K3S3
H3M3	9	0.106	3.47	3.47	0	0.9	0.9	0.02	9	K3S3
H3M4	12	0.176	2.54	2.54	0	0.9	0.9	0.02	6	K4S4
H9M2	18	0.031	3.02	3.02	0	0.9	0.9	0.03	9	K2S2
H4M4	16	0.282	1.63	1.79	1.20E-08	0.79	1	0.10	2	K4S4/K4S2
H8M4	32	0.214	1.34	1.4	2.80E-03	0.86	1	0.10	2	K4S4