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. 2008 Dec 12;9:600. doi: 10.1186/1471-2164-9-600

Table 1.

Key genes encoding synthesis of TAG, wax esters, PHA, glycogen and PolyP by R. jostii RHA1.

Gene ID Gene name Enzyme name Length (aa) Accession number* Selected ortholog Aminoacid identity (%)
ro00753 phaC1 PHA synthase 568 YP_700746 PhaCRrR. ruber 37
ro00754 phaZ1 PHA depolymerase 323 YP_700747 ORF4 R. ruber 12
ro03778 phaC2 PHA synthase 565 YP_703736 PhaCRrR. ruber 39
ro03776 phaZ2 PHA depolymerase 271 YP_703734 ORF4 R. ruber 14
ro04491 phaC3 PHA synthase 565 YP_704435 PhaCRrR. ruber 39
ro04489 phaZ3 PHA depolymerase 274 YP_704433 ORF4 R. ruber 14
ro05974 glgA Probable glycosyltransferase 406 YP_705909 GlgA Mycobacterium sp. MCS 73
ro05975 glgC ADP glucose Pyrophosphorylase 404 YP_705910 GlgC M. tuberculosis H37Rv 83
ro01447 glgP Glycogen phosphorylase 862 YP_701423 GlgP M. tuberculosis H37Rv 69
ro01448 glgE Probable alpha amylase 672 YP_701424 GlgE M. smegmatis 66
ro01449 glgB Glycogen branching enzyme 732 YP_701425 GlgB Mycobacterium sp. MCS 70
ro01056 glgX Probable glycogen debranching enzyme 753 YP_701041 GlgX Mycobacterium sp. MCS 75
ro00023 atf1 WS/DGAT 436 YP_700017 Atf1 A. baylyi ADP1 21
ro00024 atf2 WS/DGAT 477 YP_700018 Atf1 A. baylyi ADP1 24
ro00039 atf3 WS/DGAT 473 YP_700033 Atf1 A. baylyi ADP1 23
ro00087 atf4 WS/DGAT 461 YP_700081 Atf1 A. baylyi ADP1 32
ro00583 atf5 WS/DGAT 430 YP_700576 Atf1 A. baylyi ADP1 26
ro01601 atf6 WS/DGAT 453 YP_701572 Atf1 A. baylyi ADP1 38
ro02966 atf7 WS/DGAT 467 YP_702929 Atf1 A. baylyi ADP1 37
ro05356 atf8 WS/DGAT 463 YP_705294 Atf1 A. baylyi ADP1 37
ro05649 atf9 WS/DGAT 484 YP_705586 Atf1 A. baylyi ADP1 21
ro06332 atf10 WS/DGAT 474 YP_706267 Atf1 A. baylyi ADP1 27
ro06855 atf11 WS/DGAT 464 YP_706785 Atf1 A. baylyi ADP1 29
ro08369 atf12 WS/DGAT 301 YP_707571 Atf1 A. baylyi ADP1 35
ro08645 atf13 WS/DGAT 473 YP_707847 Atf1 A. baylyi ADP1 36
ro08660 atf14 WS/DGAT 497 YP_707862 Atf1 A. baylyi ADP1 24
ro06503 ppk Polyphosphate kinase 734 YP_706434 Ppk Pseudomonas aeruginosa 39
ro02065 ppx1 Exopolyphosphatase 317 YP_702030 Ppx Pseudomonas aeruginosa 17
ro05780 ppx2 Exopolyphosphatase 314 YP_705716 Ppx Pseudomonas aeruginosa 17
ro06647 ppx3 Exopolyphosphatase 333 YP_706578 Ppx Pseudomonas aeruginosa 11

* NCRI protein data base