TABLE 2.
Oligonucleotides used to generate recombinant TodS fragments and site-directed mutants
| Plasmids | Sequence (5′-3′) | |
|---|---|---|
| For expression plasmids of TodS fragments | ||
| pHK1 | GGGGCTAGCAATTATTATAATATCTGCCTCAAG | |
| CGCGGATCCTCAGTCGGATTGAAATGGAAG | ||
| pRRR | GAGGCTAGCCAGCCTCGGGTGCTAAT | |
| CACGGATCCTCACCCCTGATCGGAAAGCTC | ||
| pHK2 | GCATACGGATCCTCACTGTCTGGCAGGGATACT | |
| For site-directed mutagenesis of plasmids pTodS and pMIR66 | ||
| pAB1 and pAB4 | TTGCCAAGGTGAGCGCTGAGTTGCGCACTCCa | |
| GGAGTGCGCAACTCAGCGCTCACCTTGGCAAa | ||
| pAB2 and pAB5 | ACCTGTTGATTACAGCCCTGATGATGCCTa | |
| AGGCATCATCAGGGCTGTAATCAACAGGTa | ||
| pAB3 and pAB6 | GCAGCCTATATTGCAGCCGAGATAAACCAACCGa | |
| CGGTTGGTTTATCTCGGCTGCAATATAGGCTGCa | ||
Mismatch nucleotides for amino acid replacement to alanine are underlined.