TABLE 1.
Summary properties of SIV-derived Mamu-A*01 peptides
SIV Gene | Peptide name | Amino Acid Sequence | Reference | MFI | % IFN-γ CD8+ T cells |
---|---|---|---|---|---|
Gag | LA9 | LAPVPIPFA | (Allen et al., 2001) | 23.4 | 9.52 |
Gag | CM9 | CTPYDINQM | (Allen et al., 1998) | 34.4 | 67.25 |
Gag | LW9 | LSPRTLNAW | (Allen et al., 2001) | 1.72 | 7.81 |
Pol | LV10 | LGPHYTPKIV | (Allen et al., 2001) | 1.58 | 4.02 |
Pol | SV9 | STPPLVRLV | (Egan et al., 1999) | 45.8 | 10.1 |
Pol | GM10 | GSPAIFQYTM | (Allen et al., 2001) | 9.06 | 2.51 |
Pol | MI8 | MTPAERLI | (Allen et al., 2001) | 11.2 | 4.65 |
Seven previously defined Mamu-A*01 restricted SIV Gag and Pol epitopes were tested for stabilization of cell surface expression of Mamu-A*01/Kb in RMA-S cells, and induction of intracellular IFN-γ production in CD8+ T cells after IVS of rVV-SIVGag-Pol immunized Mamu-A*01/Kb Tg mice (N=2) for each peptide. Background binding to a control peptide was subtracted for RMA-S assays, and the percentage of IFN-γ+ CD8+ T cells from a mock-stimulated culture was subtracted from all ICC assay results. The mean fluorescence intensity (MFI) and percentage of intracellular IFN-γ positive of CD8+ T cells were determined by flow cytometry using a FACS-Canto™ (BDIS, San Jose, CA). Results shown are an average of N=2 mice with <25% standard error from the mean.