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. 2009 Mar 13;84(3):328–338. doi: 10.1016/j.ajhg.2009.01.023

Table 1.

Eleven Significant SNPs with the Same Effect in the Discovery Group and the First Replication Set

SNP Chr. Gene p Value (DG)a p Value (RS1)b Homogeneity Testc p Value Common Genotype Effectc OR [95% CI]c
rs3914132 7q22.1 RELN 1.00 × 10−4 0.003 0.403 1.22 × 10−6 1.631 [1.335–1.993]
rs1112578 2q32.2 2.80 × 10−4 0.004 0.493 4.34 × 10−6 0.691 [0.590–0.810]
rs4667276 2q32.2 0.001 0.002 0.690 6.91 × 10−6 0.697 [0.594–0.817]
rs17761499 16q23.2 CDYL2 8.89 × 10−5 0.017 0.200 1.05 × 10−5 1.470 [1.237–1.748]
rs11243426 9q34.13 0.002 0.016 0.463 1.11 × 10−4 1.409 [1.183–1.679]
rs4603268 11q21 MAML2 0.002 0.033 0.347 2.42 × 10−4 1.367 [1.156–1.617]
rs2246288 10q26.3 INPP5A 0.006 0.016 0.766 2.56 × 10−4 0.683 [0.556–0.840]
rs4246059 6p25.2 MYLK4 0.006 0.015 0.686 2.57 × 10−4 1.335 [1.143–1.560]
rs10485428 6q12 BAI3 0.003 0.039 0.345 5.23 × 10−4 1.671 [1.245–2.244]
rs670358 11q13.1 0.028 0.022 0.909 0.001 0.670 [0.522–0.860]
rs2330247 21q22.3 0.022 0.046 0.773 0.002 0.723 [0.585–0.893]
a

p value in the discovery group.

b

p value in the first replication set.

c

Combined data of discovery group and first replication set.