Table 2. Numbers of Haplotypes of the 48 CNVs.
| Marker | Haplotypes Identified by | Previous Classification | ||
| Sperm | Population | Total | ||
| Rs2690640 | 1 | 0 | 1 | PSV |
| Rs2910550 | 1 | 0 | 1 | PSV |
| Rs529820 | 1 | 0 | 1 | PSV |
| Rs2388099 | 1 | 1 | 2 | PSV |
| Rs2604079 | 1 | 1 | 2 | PSV |
| Rs2931178 | 1 | 1 | 2 | PSV |
| Rs3019009 | 1 | 1 | 2 | PSV |
| Rs633700 | 1 | 1 | 2 | PSV |
| Rs680347 | 1 | 1 | 2 | PSV |
| Rs1060021 | 1 | 2 | 3 | PSV |
| Rs2960392 | 1 | 2 | 3 | PSV |
| Rs624516 | N/D | N/D | N/D | PSV |
| Rs1059996 | 1 | 1 | 2 | SID |
| Rs2903718 | 1 | 1 | 2 | SID |
| Rs375160 | 1 | 1 | 2 | SID |
| Rs595203 | 1 | 1 | 2 | SID |
| Rs2690645 | 1 | 2 | 3 | SID |
| Rs1754228 | 2 | 0 | 2 | SID |
| Rs2461070 | 2 | 0 | 2 | SID |
| Rs439825 | 2 | 0 | 2 | SID |
| Rs1363818 | 2 | 1 | 3 | SID |
| Rs2194189 | 2 | 1 | 3 | SID |
| Rs2641915 | 2 | 1 | 3 | SID |
| Rs2651432 | 2 | 1 | 3 | SID |
| Rs406372 | 2 | 1 | 3 | SID |
| Rs428259 | 2 | 1 | 3 | SID |
| Rs1025356 | 3 | 0 | 3 | SID |
| Rs1056119 | 3 | 0 | 3 | SID |
| Rs879886 | 3 | 0 | 3 | SID |
| Rs889206 | 3 | 0 | 3 | SID |
| Rs440199 | 3 | 1 | 4 | SID |
| Rs2690641 | 1 | 0 | 1 | MSV |
| Rs394595 | 1 | 0 | 1 | MSV |
| Rs1057729 | 1 | 1 | 2 | MSV |
| Rs2781957 | 1 | 1 | 2 | MSV |
| Rs2868007 | 1 | 1 | 2 | MSV |
| Rs505235 | 2 | 0 | 2 | MSV |
| Rs746659 | 2 | 0 | 2 | MSV |
| Rs964055 | 2 | 0 | 2 | MSV |
| Rs1042724 | 2 | 1 | 3 | MSV |
| Rs2161510 | 2 | 1 | 3 | MSV |
| Rs2287968 | 2 | 1 | 3 | MSV |
| Rs2868008 | 2 | 1 | 3 | MSV |
| Rs2939843 | 2 | 1 | 3 | MSV |
| Rs2698877 | 3 | 0 | 3 | MSV |
| Rs296349 | 3 | 0 | 3 | MSV |
| Rs675597 | 3 | 0 | 3 | MSV |
| Rs2740083 | 3 | 1 | 4 | MSV |