Table V.
Tentative novel PCs (30)
For details, see the legend to Table I. PINc, nucleotide-binding protein; DOD, dodecapeptide; SAP, DNA binding domain named after SAF-A/B, Acinus, and PIAS; PUA, PseudoUridine and Archaeosine transglycosylase; CBS, cystathionine-beta synthase; SAM, S-adenosylmethionine.
| Complex number | Gene | Annotation | pI | Association value | Fractions | Operon number | Ref. |
|---|---|---|---|---|---|---|---|
| PC-3 | PF0037 | Hypothetical protein PF0037 | 8.5 | 0.19 | 6 | 9 | |
| PF0038 | Glyoxalase II family member | 6.0 | 48 | 9 | |||
| PC-14 | PF0232 | Transcription regulatory protein, arsR family | 6.2 | 0.15 | 5 | 57 | |
| PF0233 | Acetyl-CoA synthetase, α subunit | 6.0 | 45 | 73 | |||
| PC-15 | PF0378 | 50 S ribosomal protein L31 | 10.1 | 0.19 | 14 | 85 | |
| PF0379 | 50 S ribosomal protein L39e | 12.4 | 25 | 85 | |||
| PC-16 | PF0382 | Prefoldin, β subunit | 9.5 | 0.18 | 16 | 86 | 74 |
| PF0383 | Hypothetical protein PF0383 | 4.6 | 17 | 86 | |||
| PC-18 | PF0431 | Phosphoribosylaminoimidazole synthetase | 5.3 | 0.23 | 2 | 98 | |
| PF0432 | Putative sugar-catabolism phosphotransferase | 5.2 | 4 | 98 | |||
| PC-19 | PF0440 | Ribonucleotide reductase | 6.1 | 0.15 | 44 | 75 | |
| PF0441 | Galactose-1-phosphate uridylyltransferase | 8.6 | 6 | ||||
| PC-20 | PF0491 | Transcription initiation factor E subunit α | 8.8 | 0.20 | 7 | 110 | |
| PF0492 | Hypothetical protein PF0492 | 5.6 | 18 | ||||
| PC-23 | PF0540 | Thymidylate synthase | 8.9 | 0.23 | 15 | ||
| PF0541 | Methionine aminopeptidase | 6.7 | 2 | 76 | |||
| PC-27 | PF0637 | 〈CRISPR-associated protein, MJ0385 (cas_Csa4)〉 | 6.3 | 0.23 | 7 | 146 | |
| PF0638 | 〈CRISPR-associated protein, MJ0385 (cas_Csa4)〉 | 6.8 | 2 | 146 | |||
| PC-36 | PF0982 | Hypothetical protein PF0982 | 4.8 | 0.05 | 1 | 218 | |
| PF0983 | PCNA sliding clamp (proliferating cell nuclear antigen) | 4.5 | 104 | 218 | 77 | ||
| PC-39 | PF1115 | 〈PUA (PUA)〉 | 8.0 | 0.20 | 11 | 253 | |
| PF1116 | Glycerol-3-phosphate cytidyltransferase | 8.6 | 24 | ||||
| PC-43 | PF1189 | Hypothetical protein PF1189 | 5.5 | 0.14 | 2 | 268 | |
| PF1190 | 〈Rubrerythrin (rubrerythrin)〉 | 5.2 | 66 | 268 | |||
| PC-45 | PF1242 | Dehydrogenase subunit α | 8.5 | 0.23 | 16 | 284 | |
| PF1243 | Hypothetical protein PF1243 | 5.0 | 2 | 284 | |||
| PC-53 | PF1375 | Elongation factor Tu | 8.7 | 0.39 | 79 | 318 | |
| PF1376 | 30 S ribosomal protein S10 | 10.2 | 19 | 318 | |||
| PC-54 | PF1379 | Cell division protein pelota | 7.2 | 0.22 | 4 | 319 | |
| PF1380 | Arginyl-tRNA synthetase | 6.2 | 33 | 319 | |||
| PC-55 | PF1385 | DNA polymerase, bacteriophage type | 9.0 | 0.25 | 5 | 321 | |
| PF1386 | 〈Helix-turn-helix type 3 (HTH_CROC1)〉 | 9.3 | 4 | 321 | |||
| PC-57 | PF1454 | 〈Radical SAM (Radical_SAM)〉 | 6.3 | 0.20 | 33 | 334 | |
| PF1455 | 〈von Willebrand factor, type A (VWFADOMAIN)〉 | 4.9 | 2 | 334 | 78 | ||
| PC-59 | PF1482 | 〈β-Grasp fold, ferredoxin-type (ferredoxin_fold)〉 | 8.2 | 0.21 | 12 | 338 | |
| PF1483 | 〈DNA-binding SAP (SAP)〉 | 5.3 | 19 | ||||
| PC-61 | PF1556 | Peptidyl-tRNA hydrolase | 9.5 | 0.19 | 8 | 359 | |
| PF1557 | 〈Rossmann-like α/β/α sandwich fold〉 | 5.8 | 31 | 359 | |||
| PC-66 | PF1614 | Hypothetical protein PF1614 | 8.6 | 0.14 | 1 | 372 | |
| PF1615 | 〈Intein DOD homing endonuclease (INTEIN_ENDONUCLEASE)〉 | 9.0 | 57 | 372 | |||
| PC-70 | PF1716 | 〈Nucleotide-binding protein, PINc (PINc)〉 | 9.0 | 0.19 | 1 | 389 | |
| PF1717 | 〈Translation initiation factor IF-2 γ subunit〉 | 8.2 | 37 | 389 | |||
| PF1718 | 〈Wyosine base formation (Wyosine_form)〉 | 6.9 | 20 | ||||
| PC-71 | PF1721 | 〈Triphosphoribosyl-dephospho-CoA protein (CitG)〉 | 7.8 | 0.15 | 1 | 390 | |
| PF1722 | Archaeal histone a2 | 9.6 | 50 | ||||
| PC-73 | PF1730 | Thymidylate kinase | 9.2 | 0.23 | 1 | 393 | |
| PF1731 | Signal recognition particle SRP54 | 9.4 | 5 | 393 | 79 | ||
| PC-78 | PF1813 | 50 S ribosomal protein L24 | 10.4 | 0.25 | 2 | 408 | |
| PF1814 | 50 S ribosomal protein L14 | 11.3 | 8 | 408 | |||
| PC-80 | PF1827 | 〈Uncharacterized conserved protein, 2×CBS, MJ1225 type〉 | 8.5 | 0.18 | 37 | ||
| PF1828 | Hypothetical protein PF1828 | 8.9 | 11 | ||||
| PC-84 | PF1874 | Glyceraldehyde-3-phosphate dehydrogenase | 6.0 | 0.18 | 18 | ||
| PF1875 | Hypothetical protein PF1875 | 4.4 | 15 | ||||
| PC-86 | PF1926 | Recombinase (RadA) | 6.2 | 0.21 | 14 | 80 | |
| PF1927 | 〈Uncharacterized conserved protein UCP015877, zinc finger〉 | 7.0 | 2 | ||||
| PC-88 | PF1974 | Thermosome, single subunit | 4.9 | 0.08 | 99 | 81 | |
| PF1975 | 〈Phosphoenolpyruvate carboxylase, Archaea (DUF557)〉 | 5.9 | 4 | ||||
| PC-89 | PF1990 | Transcription antitermination protein NusG | 8.2 | 0.26 | 6 | 450 | |
| PF1991 | 50 S ribosomal protein L11 | 5.4 | 7 | 450 | |||
| PC-93 | PF2039 | Hypothetical protein PF2039 | 5.5 | 0.23 | 2 | 463 | |
| PF2040 | 〈Profilin/allergen (PROFILIN)〉 | 9.1 | 3 | 463 |