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. 2009 Feb 4;47(4):932–939. doi: 10.1128/JCM.01449-08

TABLE 3.

Identifications of the 39 strains of S. mitis, S. pneumoniae, and S. oralis on the basis of the partial gdh sequencesa

Taxonomic species No. of strains Best taxon match Next best taxon match Identity
Maximum score Maximum score difference from next best taxon match
No. of base pairs %
S. mitis 10 S. mitis S. pneumoniae 410-419 98.5-100 708-722 18-27
S. mitis 1 S. mitis S. pseudopneumoniae 410 97 702 0
S. oralisb 11 S. oralis S. mitis 430-431 99-100 778 36-195
S. pneumoniae 17 S. pneumoniae S. mitis 423-434 99-100 764-780 67-91
a

Data are compiled for strains belonging to the same species. The partial gdh gene sequences are all 431 bp in length.

b

The gdh sequences of strains SSI 220/202, SK155, and SK610 and type strain CCUG24891 were achieved in our laboratory. The gdh sequences of strains SK100, SK152, SK555, SK394, SK570, SK573, and SK580 were downloaded from M. Kilian's website (www.immi.au.dk/service/download/kilian).